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The map label for this gene is ytdA

Identifier: 16080137

GI number: 16080137

Start: 3154735

End: 3155553

Strand: Reverse

Name: ytdA

Synonym: BSU30850

Alternate gene names: 16080137

Gene position: 3155553-3154735 (Counterclockwise)

Preceding gene: 16080141

Following gene: 16080135

Centisome position: 74.85

GC content: 44.69

Gene sequence:

>819_bases
ATGATAAAAAAAGCGATCATTCCTGCAGGCGGATTCGGCACGAGAAATCTGCCGGTGACGAAGGTGATTCCGAAAGAAAT
GTTTCCGGTAGGATCTAAGCCTGTGATTCATTATCTTGTTGAAGAATTAAAGGAGTCAGGCATTGAGGACATTTTGATGG
TTGTATCGAGCCATAAAAATCTGATTGTCGACTATTTTGATTCCTCTTTGGCACTTGAGGCTTTTTTGGCCTCTAAGAAT
AAACTGCATTTACTTAGAGAGCATCCCATTCCGGATATACGGATTCACTATGTGCGGCAGCCTTATGCAAAGGGTCTTGG
CGACGCCATTTCTTTCGGAAAGCAATTTGCAGGAGGAGAGCCTTTTGCCGTCGTTTTGCCAGATGATCTGATTTTTTCCG
CCAATCAGCCGGCTTTGGGGCAGCTGATTGAAGCGTATACGAAATATCAGTCCAGTGTGATCGGCTTAAAAGAAACAAAA
ACGGAGGATTTACATCATTACGGGGTGATAAAAGGGGAGCCTGTTGAAAAAGGGCTTTATCGCATACAGGATATTGTGGA
AAAGCCTAAACAAAACCCTCCGTCTCATTTTGCCGCAGCAGGGCGTTATATTTTCACACCGGATATTTTTAATGAGCTGG
AGGCATTAGAAGCTGATAGCGGAGGAGAAGTGCAGGTAACGGATGCGATAAAAGCTTCGCTCGGGGCATGTACCGTATAC
GGGAAATTGCTAGAGGGCGAGCGGTATGACATCGGCCTGCAAAAGGATTATCTGAAGCTGATTTACGATATGCTGAAAAC
GGAAAAGAACCCCCAATAA

Upstream 100 bases:

>100_bases
CGCTTTCTGCCCAGTTGCTTCCGCCTAATTTCAGATGTACAAACATCGGGATGCGCTCTTGGAATATCATGTAATAAACA
TGAGCTGAGGGGAAAATACC

Downstream 100 bases:

>100_bases
TTGGGGGTTCAATCAGCGTGGAGATCGCCGAATGTGGTCATGATTCCCTCTTCGTCAAGTTCTTCTTCATAGCGCTCATG
GGCTCTGCTTTGATAAACGG

Product: UTP-glucose-1-phosphate uridylyltransferase

Products: NA

Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MIKKAIIPAGGFGTRNLPVTKVIPKEMFPVGSKPVIHYLVEELKESGIEDILMVVSSHKNLIVDYFDSSLALEAFLASKN
KLHLLREHPIPDIRIHYVRQPYAKGLGDAISFGKQFAGGEPFAVVLPDDLIFSANQPALGQLIEAYTKYQSSVIGLKETK
TEDLHHYGVIKGEPVEKGLYRIQDIVEKPKQNPPSHFAAAGRYIFTPDIFNELEALEADSGGEVQVTDAIKASLGACTVY
GKLLEGERYDIGLQKDYLKLIYDMLKTEKNPQ

Sequences:

>Translated_272_residues
MIKKAIIPAGGFGTRNLPVTKVIPKEMFPVGSKPVIHYLVEELKESGIEDILMVVSSHKNLIVDYFDSSLALEAFLASKN
KLHLLREHPIPDIRIHYVRQPYAKGLGDAISFGKQFAGGEPFAVVLPDDLIFSANQPALGQLIEAYTKYQSSVIGLKETK
TEDLHHYGVIKGEPVEKGLYRIQDIVEKPKQNPPSHFAAAGRYIFTPDIFNELEALEADSGGEVQVTDAIKASLGACTVY
GKLLEGERYDIGLQKDYLKLIYDMLKTEKNPQ
>Mature_272_residues
MIKKAIIPAGGFGTRNLPVTKVIPKEMFPVGSKPVIHYLVEELKESGIEDILMVVSSHKNLIVDYFDSSLALEAFLASKN
KLHLLREHPIPDIRIHYVRQPYAKGLGDAISFGKQFAGGEPFAVVLPDDLIFSANQPALGQLIEAYTKYQSSVIGLKETK
TEDLHHYGVIKGEPVEKGLYRIQDIVEKPKQNPPSHFAAAGRYIFTPDIFNELEALEADSGGEVQVTDAIKASLGACTVY
GKLLEGERYDIGLQKDYLKLIYDMLKTEKNPQ

Specific function: May Play A Role In Stationary Phase Survival. [C]

COG id: COG1210

COG function: function code M; UDP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDPGP type 2 family

Homologues:

Organism=Escherichia coli, GI1787488, Length=270, Percent_Identity=37.7777777777778, Blast_Score=157, Evalue=1e-39,
Organism=Escherichia coli, GI1788355, Length=268, Percent_Identity=36.9402985074627, Blast_Score=153, Evalue=1e-38,
Organism=Escherichia coli, GI1788351, Length=227, Percent_Identity=27.7533039647577, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790224, Length=241, Percent_Identity=27.8008298755187, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): YTDA_BACSU (P42407)

Other databases:

- EMBL:   U20447
- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   A69990
- RefSeq:   NP_390963.1
- ProteinModelPortal:   P42407
- SMR:   P42407
- EnsemblBacteria:   EBBACT00000001933
- GeneID:   937119
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30850
- NMPDR:   fig|224308.1.peg.3088
- GenoList:   BSU30850
- GeneTree:   EBGT00050000000561
- HOGENOM:   HBG688195
- OMA:   SRMKYIT
- ProtClustDB:   CLSK873280
- BioCyc:   BSUB:BSU30850-MONOMER
- BRENDA:   2.7.7.9
- InterPro:   IPR005835

Pfam domain/function: PF00483 NTP_transferase

EC number: =2.7.7.9

Molecular weight: Translated: 30183; Mature: 30183

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKAIIPAGGFGTRNLPVTKVIPKEMFPVGSKPVIHYLVEELKESGIEDILMVVSSHKN
CCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCC
LIVDYFDSSLALEAFLASKNKLHLLREHPIPDIRIHYVRQPYAKGLGDAISFGKQFAGGE
EEEEECCCHHHHHHHHHCCCCEEHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCC
PFAVVLPDDLIFSANQPALGQLIEAYTKYQSSVIGLKETKTEDLHHYGVIKGEPVEKGLY
CEEEECCCHHEECCCCCHHHHHHHHHHHHHHHHCCCHHCCCHHHHHCCCCCCCHHHHHHH
RIQDIVEKPKQNPPSHFAAAGRYIFTPDIFNELEALEADSGGEVQVTDAIKASLGACTVY
HHHHHHHCCCCCCCHHHHHCCCEEECHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHH
GKLLEGERYDIGLQKDYLKLIYDMLKTEKNPQ
HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIKKAIIPAGGFGTRNLPVTKVIPKEMFPVGSKPVIHYLVEELKESGIEDILMVVSSHKN
CCCCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCC
LIVDYFDSSLALEAFLASKNKLHLLREHPIPDIRIHYVRQPYAKGLGDAISFGKQFAGGE
EEEEECCCHHHHHHHHHCCCCEEHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCC
PFAVVLPDDLIFSANQPALGQLIEAYTKYQSSVIGLKETKTEDLHHYGVIKGEPVEKGLY
CEEEECCCHHEECCCCCHHHHHHHHHHHHHHHHCCCHHCCCHHHHHCCCCCCCHHHHHHH
RIQDIVEKPKQNPPSHFAAAGRYIFTPDIFNELEALEADSGGEVQVTDAIKASLGACTVY
HHHHHHHCCCCCCCHHHHHCCCEEECHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHH
GKLLEGERYDIGLQKDYLKLIYDMLKTEKNPQ
HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377