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The map label for this gene is ytmB

Identifier: 16080109

GI number: 16080109

Start: 3131152

End: 3131394

Strand: Reverse

Name: ytmB

Synonym: BSU30570

Alternate gene names: 16080109

Gene position: 3131394-3131152 (Counterclockwise)

Preceding gene: 16080110

Following gene: 16080107

Centisome position: 74.28

GC content: 40.74

Gene sequence:

>243_bases
TTGGGAATGCCTGTTGAATTTAATACACTGATTGTGACAAAAGGAAAAGAAGTTCGCATAGATGAAAATATATTCACGTT
AGAGAAGGACGGATACCGAGTATATCCGATGGAGATTCCAATGGATGTACGCAAAACAAAGTTTGGCGAAAAGTCAGGCA
CAGCTGAAGTGCAGAAGCTTCAATGGGAAGAAGGCCGGACCATCATTACATACAAGCTGACTTCTTTGCATTCCGTCAAT
TAA

Upstream 100 bases:

>100_bases
AAACCGGCGTATCGTGCGGCAGCTCACACAATGGATGAAAAACCGCTGACAGTGAAATATGTTATGATAAAGAAAAAAGA
GAACGAAAGGGGATTTCACT

Downstream 100 bases:

>100_bases
AACAAGCCAAGAGCATAATTGCTCTTGGCTTTTGTTTTTTATACGAGAGGGCCGCCTGCCTGGGCGATGGCATCGGTATG
TGCGAACTTTTTAAAGTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MGMPVEFNTLIVTKGKEVRIDENIFTLEKDGYRVYPMEIPMDVRKTKFGEKSGTAEVQKLQWEEGRTIITYKLTSLHSVN

Sequences:

>Translated_80_residues
MGMPVEFNTLIVTKGKEVRIDENIFTLEKDGYRVYPMEIPMDVRKTKFGEKSGTAEVQKLQWEEGRTIITYKLTSLHSVN
>Mature_79_residues
GMPVEFNTLIVTKGKEVRIDENIFTLEKDGYRVYPMEIPMDVRKTKFGEKSGTAEVQKLQWEEGRTIITYKLTSLHSVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTMB_BACSU (O34365)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   B69996
- RefSeq:   NP_390935.1
- PDB:   2NWA
- PDBsum:   2NWA
- ProteinModelPortal:   O34365
- SMR:   O34365
- EnsemblBacteria:   EBBACT00000001349
- GeneID:   937228
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30570
- NMPDR:   fig|224308.1.peg.3060
- GenoList:   BSU30570
- GeneTree:   EBGT00050000001804
- HOGENOM:   HBG314004
- OMA:   GMPVEFN
- ProtClustDB:   CLSK887759
- BioCyc:   BSUB:BSU30570-MONOMER
- InterPro:   IPR019699

Pfam domain/function: PF10763 DUF2584

EC number: NA

Molecular weight: Translated: 9267; Mature: 9136

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMPVEFNTLIVTKGKEVRIDENIFTLEKDGYRVYPMEIPMDVRKTKFGEKSGTAEVQKL
CCCCCCCCEEEEECCCEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEE
QWEEGRTIITYKLTSLHSVN
EECCCCEEEEEEECEEEECC
>Mature Secondary Structure 
GMPVEFNTLIVTKGKEVRIDENIFTLEKDGYRVYPMEIPMDVRKTKFGEKSGTAEVQKL
CCCCCCCEEEEECCCEEEECCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEE
QWEEGRTIITYKLTSLHSVN
EECCCCEEEEEEECEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377