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The map label for this gene is yshE

Identifier: 16079909

GI number: 16079909

Start: 2920517

End: 2920921

Strand: Reverse

Name: yshE

Synonym: BSU28570

Alternate gene names: 16079909

Gene position: 2920921-2920517 (Counterclockwise)

Preceding gene: 16079910

Following gene: 16079908

Centisome position: 69.29

GC content: 44.2

Gene sequence:

>405_bases
ATGAGTGATTTTTGGGAAAACGAGCTTGTGGAAATCGCGGCATATTACAGTGTCGCGGTTCTCTGCCTCGTCCTCTTTTT
GACTGTGTTTGAGCTGGTGACGGCTTATAAAAACTGGGAAGAGATTCAAAAAGGAAATCTTGCGGTGGCAATGGCGACCG
GCGGAAAAATTTTGGGAATCGCAAACGTATTTCAGCATTCCATCTCCCAGCATAATTCGCTGCTGCAAATGATCGGCTGG
GGCGTTTACGGGTTTGTTATGCTTCTGATCAGCTACTTTATTTTTGAGTTTTTGACTCCGCGGTTTAAAATTGATCAGGA
AATCGAAAATGATAACCGGGCTGTCGGCTTTATTTCATTTGTCATTTCTGTCGGGCTTTCTTTTGTGGTGGCAGCCGGAA
TATAA

Upstream 100 bases:

>100_bases
TGAAAAACCACCGCAGCGTCAAAAGTTCCCGTTTCGGTGAAGCAGGTGAGGGAGGATCAGGCGTTACGGTTGTTGAACTA
AAATAAAAGGGAGTATGGCC

Downstream 100 bases:

>100_bases
GGGGACGGAGAATAGATGGAAAAGCTTGCGAAAATACTGCTCGCCGCAGCGGGAATCTTTTTGTTAATTGGTCTTATATA
TCTGTTCATATTATGAGAAA

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSDFWENELVEIAAYYSVAVLCLVLFLTVFELVTAYKNWEEIQKGNLAVAMATGGKILGIANVFQHSISQHNSLLQMIGW
GVYGFVMLLISYFIFEFLTPRFKIDQEIENDNRAVGFISFVISVGLSFVVAAGI

Sequences:

>Translated_134_residues
MSDFWENELVEIAAYYSVAVLCLVLFLTVFELVTAYKNWEEIQKGNLAVAMATGGKILGIANVFQHSISQHNSLLQMIGW
GVYGFVMLLISYFIFEFLTPRFKIDQEIENDNRAVGFISFVISVGLSFVVAAGI
>Mature_133_residues
SDFWENELVEIAAYYSVAVLCLVLFLTVFELVTAYKNWEEIQKGNLAVAMATGGKILGIANVFQHSISQHNSLLQMIGWG
VYGFVMLLISYFIFEFLTPRFKIDQEIENDNRAVGFISFVISVGLSFVVAAGI

Specific function: Unknown

COG id: COG3766

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0719 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YSHE_BACSU (P94546)

Other databases:

- EMBL:   Z75208
- EMBL:   AL009126
- PIR:   E69985
- RefSeq:   NP_390735.1
- ProteinModelPortal:   P94546
- EnsemblBacteria:   EBBACT00000001150
- GeneID:   937969
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU28570
- NMPDR:   fig|224308.1.peg.2860
- GenoList:   BSU28570
- GeneTree:   EBGT00050000002232
- HOGENOM:   HBG552697
- OMA:   YKNWEEI
- ProtClustDB:   CLSK873508
- BioCyc:   BSUB:BSU28570-MONOMER
- InterPro:   IPR007140

Pfam domain/function: PF03994 DUF350

EC number: NA

Molecular weight: Translated: 15013; Mature: 14882

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1178e888)-; HASH(0x112911dc)-; HASH(0x10b27304)-; HASH(0xdabc80c)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFWENELVEIAAYYSVAVLCLVLFLTVFELVTAYKNWEEIQKGNLAVAMATGGKILGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEECCCCHHHH
ANVFQHSISQHNSLLQMIGWGVYGFVMLLISYFIFEFLTPRFKIDQEIENDNRAVGFISF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHH
VISVGLSFVVAAGI
HHHHHHHHHHHCCH
>Mature Secondary Structure 
SDFWENELVEIAAYYSVAVLCLVLFLTVFELVTAYKNWEEIQKGNLAVAMATGGKILGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEECCCCHHHH
ANVFQHSISQHNSLLQMIGWGVYGFVMLLISYFIFEFLTPRFKIDQEIENDNRAVGFISF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHH
VISVGLSFVVAAGI
HHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377