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The map label for this gene is yrrD

Identifier: 16079800

GI number: 16079800

Start: 2805704

End: 2806228

Strand: Reverse

Name: yrrD

Synonym: BSU27470

Alternate gene names: 16079800

Gene position: 2806228-2805704 (Counterclockwise)

Preceding gene: 16079801

Following gene: 255767627

Centisome position: 66.57

GC content: 44.38

Gene sequence:

>525_bases
ATGAGTCTAAGGCGCAAAGCAAAACCTAAGCCTGTTCAACAAAAGGTGGTTGATCACACTTTGAGAACATGCCATGAAGT
AGAAGGATTCCCAGTATACTCAGAACGAACTTCTAGTTATCTCGGGACAATTTCCGATATTTGTTTTTCTCTGAAAGGAG
ATTGTCTTGGGTTTATTCTTGCACAAAAACGCTTTTTGCATCATCATCATGCGCTATTACGGGCGTGTGATATCTCTTCC
ATTTTTGATGACCGCATATTGGCTTCGGTCAGTTCAGAACAGCTTTTGCCTCTTCCGAAATCATGCTTCACATACGAGCA
GATGAAGATGAAGCTTGTGAAATCGCAAGAGGGGGATATATTGGGGATGCTGGAAGATGTATACTTTTGTTTGGACAGGG
GCATAATCGTAGCATATGAACTCTCGGACGGTTTCTTTTCTGACCTGGCGGGAAGCAAGCGCCAGATCCAAAGAGCGGAT
TCGCTTGTCGAGGTGCGGAAAGACGAGATCGTTCTGAACGGATAG

Upstream 100 bases:

>100_bases
AGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCAATAAAATGCTCCCGTGCAAGCGGGAGTTTTTTTTCATTTGC
AGTGGAATTGATTTCATCGT

Downstream 100 bases:

>100_bases
AGGTGTGAGGTATGCTTATATGCCCGAATTGCAAAAGTAAGGATATCGGCAAAATCGGCGTGAACCAATATTATTGCTGG
GGCTGTTTTATTGAACTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSLRRKAKPKPVQQKVVDHTLRTCHEVEGFPVYSERTSSYLGTISDICFSLKGDCLGFILAQKRFLHHHHALLRACDISS
IFDDRILASVSSEQLLPLPKSCFTYEQMKMKLVKSQEGDILGMLEDVYFCLDRGIIVAYELSDGFFSDLAGSKRQIQRAD
SLVEVRKDEIVLNG

Sequences:

>Translated_174_residues
MSLRRKAKPKPVQQKVVDHTLRTCHEVEGFPVYSERTSSYLGTISDICFSLKGDCLGFILAQKRFLHHHHALLRACDISS
IFDDRILASVSSEQLLPLPKSCFTYEQMKMKLVKSQEGDILGMLEDVYFCLDRGIIVAYELSDGFFSDLAGSKRQIQRAD
SLVEVRKDEIVLNG
>Mature_173_residues
SLRRKAKPKPVQQKVVDHTLRTCHEVEGFPVYSERTSSYLGTISDICFSLKGDCLGFILAQKRFLHHHHALLRACDISSI
FDDRILASVSSEQLLPLPKSCFTYEQMKMKLVKSQEGDILGMLEDVYFCLDRGIIVAYELSDGFFSDLAGSKRQIQRADS
LVEVRKDEIVLNG

Specific function: Unknown

COG id: COG3881

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRRD_BACSU (O34402)

Other databases:

- EMBL:   AL009126
- PIR:   B69979
- RefSeq:   NP_390624.1
- ProteinModelPortal:   O34402
- EnsemblBacteria:   EBBACT00000003856
- GeneID:   937552
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU27470
- NMPDR:   fig|224308.1.peg.2749
- GenoList:   BSU27470
- GeneTree:   EBGT00050000000499
- HOGENOM:   HBG338203
- OMA:   HTLRTCH
- ProtClustDB:   CLSK887670
- BioCyc:   BSUB:BSU27470-MONOMER
- InterPro:   IPR007903
- InterPro:   IPR011033

Pfam domain/function: PF05239 PRC; SSF50346 PRCH_cytoplasmic

EC number: NA

Molecular weight: Translated: 19729; Mature: 19598

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRRKAKPKPVQQKVVDHTLRTCHEVEGFPVYSERTSSYLGTISDICFSLKGDCLGFIL
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AQKRFLHHHHALLRACDISSIFDDRILASVSSEQLLPLPKSCFTYEQMKMKLVKSQEGDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH
LGMLEDVYFCLDRGIIVAYELSDGFFSDLAGSKRQIQRADSLVEVRKDEIVLNG
HHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHCCEEECC
>Mature Secondary Structure 
SLRRKAKPKPVQQKVVDHTLRTCHEVEGFPVYSERTSSYLGTISDICFSLKGDCLGFIL
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AQKRFLHHHHALLRACDISSIFDDRILASVSSEQLLPLPKSCFTYEQMKMKLVKSQEGDI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCH
LGMLEDVYFCLDRGIIVAYELSDGFFSDLAGSKRQIQRADSLVEVRKDEIVLNG
HHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377