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The map label for this gene is yrrI

Identifier: 16079795

GI number: 16079795

Start: 2801141

End: 2802202

Strand: Reverse

Name: yrrI

Synonym: BSU27420

Alternate gene names: 16079795

Gene position: 2802202-2801141 (Counterclockwise)

Preceding gene: 255767626

Following gene: 16079794

Centisome position: 66.47

GC content: 45.67

Gene sequence:

>1062_bases
ATGCTCCAAAAACCGGTGCAGCTTTTGTTGTGGGTGGCTATTTGTTTGCTGGTTCTGTTAACAGTCTATGTCTTTTTTAT
GCTTGATATGTTATGGTCACCCTTTTGGCTCGTCATAAAAACGATCTTTATTCCCTTGATCATTTCTATTTTTATATCTT
ATTTATTGCTTCCGGTCACAGAATGGCTGCATGGCAAAGGATTGCCTAGGACTTTGAGCATCTTGGTCATTTATGTTCTT
TTTTTTGGCGGGATTGGCTGGGCGTTGTATAAAGGGGTGCCTGTTTTAATCGTGCAGCTGACGGATTTGTCAGAAAATAT
ACCCATGTTTGCCGAAACGTATAACGGGCTTCTTCTTCATGTGCATAACCATACGGATGACTGGCCTGATGGTATGCATC
ACCGTATAGATAAAATGATCCGCCAGACGGAGGCGTTTTTTGCGGGAACGATCGAGGGTGCGATCAGCGGGATCCGCAAT
GTGCTTGATTACTTCTTAATTGCTGCAACAATCCCTTTTCTCGTGTTTTATATGGTGAAGGACATTGAGTTAATGAAAAA
GACAGTATGGTACTTGACTCCGAAGTCGTGGAGAAAGCGGGGCAGCGCCTTTTTGCGGGATGTGGATGATTCGCTTGGCG
ATTATATCCGCGGCCAGCTTTTGGTCTGCTTGATTCTTGGCGTGATTGCAGGCATTTCGTTCTGGGTATTTGGGCTTCCG
TATCCGCTGATACTTGGCCTTATCTCTGGGGTAACGAATGTCATCCCGTATTTTGGCCCTTTCATCGGAGCTGTTCCTGC
GTTGTTAATTGCGATGACGATCTCAGTCAAGGCGGTTCTTGTTGTGGTGATTACGGTGTTTATTCTGCAGTTTATGGAAG
GAAATATCCTCAGTCCGTTCATTGTCGGCAGAAGCCTTAAAATGCATCCGGTCGTTATCATGCTTGCACTCCTTGCCGGA
GGGGAGCTTGCGGGTATCGTCGGGATGATTCTGGCTGTTCCTGCGACGGCTGTTTTAAAAGTAATGATGATCCATTTTTT
GCGGATGAGGACGGAGCATTGA

Upstream 100 bases:

>100_bases
AAATTAAAAGTGAAAAAATGTCCATGACTTCTGACTGACTAAAGAAACATAAAGAATAATTCCTTGTAAACCTCAAAAGA
TATAGGTGAGGTGAAAGCAG

Downstream 100 bases:

>100_bases
CATCGGCGTGCCGCTTGTCTATAATTTCTCGTAGAATACATACGAATCTCGAGTGACGGATCTGAGTACGCCGAAGCCCT
GTTAAAGAGAGAAGCTCCAT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MLQKPVQLLLWVAICLLVLLTVYVFFMLDMLWSPFWLVIKTIFIPLIISIFISYLLLPVTEWLHGKGLPRTLSILVIYVL
FFGGIGWALYKGVPVLIVQLTDLSENIPMFAETYNGLLLHVHNHTDDWPDGMHHRIDKMIRQTEAFFAGTIEGAISGIRN
VLDYFLIAATIPFLVFYMVKDIELMKKTVWYLTPKSWRKRGSAFLRDVDDSLGDYIRGQLLVCLILGVIAGISFWVFGLP
YPLILGLISGVTNVIPYFGPFIGAVPALLIAMTISVKAVLVVVITVFILQFMEGNILSPFIVGRSLKMHPVVIMLALLAG
GELAGIVGMILAVPATAVLKVMMIHFLRMRTEH

Sequences:

>Translated_353_residues
MLQKPVQLLLWVAICLLVLLTVYVFFMLDMLWSPFWLVIKTIFIPLIISIFISYLLLPVTEWLHGKGLPRTLSILVIYVL
FFGGIGWALYKGVPVLIVQLTDLSENIPMFAETYNGLLLHVHNHTDDWPDGMHHRIDKMIRQTEAFFAGTIEGAISGIRN
VLDYFLIAATIPFLVFYMVKDIELMKKTVWYLTPKSWRKRGSAFLRDVDDSLGDYIRGQLLVCLILGVIAGISFWVFGLP
YPLILGLISGVTNVIPYFGPFIGAVPALLIAMTISVKAVLVVVITVFILQFMEGNILSPFIVGRSLKMHPVVIMLALLAG
GELAGIVGMILAVPATAVLKVMMIHFLRMRTEH
>Mature_353_residues
MLQKPVQLLLWVAICLLVLLTVYVFFMLDMLWSPFWLVIKTIFIPLIISIFISYLLLPVTEWLHGKGLPRTLSILVIYVL
FFGGIGWALYKGVPVLIVQLTDLSENIPMFAETYNGLLLHVHNHTDDWPDGMHHRIDKMIRQTEAFFAGTIEGAISGIRN
VLDYFLIAATIPFLVFYMVKDIELMKKTVWYLTPKSWRKRGSAFLRDVDDSLGDYIRGQLLVCLILGVIAGISFWVFGLP
YPLILGLISGVTNVIPYFGPFIGAVPALLIAMTISVKAVLVVVITVFILQFMEGNILSPFIVGRSLKMHPVVIMLALLAG
GELAGIVGMILAVPATAVLKVMMIHFLRMRTEH

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family

Homologues:

Organism=Escherichia coli, GI1788838, Length=316, Percent_Identity=25.3164556962025, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI87082271, Length=310, Percent_Identity=25.8064516129032, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRRI_BACSU (O34472)

Other databases:

- EMBL:   AL009126
- PIR:   C69979
- RefSeq:   NP_390619.1
- EnsemblBacteria:   EBBACT00000003387
- GeneID:   937557
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU27420
- NMPDR:   fig|224308.1.peg.2744
- GenoList:   BSU27420
- GeneTree:   EBGT00070000031825
- HOGENOM:   HBG712680
- OMA:   ATIPFLV
- PhylomeDB:   O34472
- ProtClustDB:   CLSK887665
- BioCyc:   BSUB:BSU27420-MONOMER
- InterPro:   IPR002549
- PANTHER:   PTHR21716

Pfam domain/function: PF01594 UPF0118

EC number: NA

Molecular weight: Translated: 39601; Mature: 39601

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10fdb014)-; HASH(0x1130b604)-; HASH(0x110df12c)-; HASH(0x1074ddf8)-; HASH(0x111cb604)-; HASH(0x10a90564)-; HASH(0x114ec2c4)-; HASH(0x108cad00)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKPVQLLLWVAICLLVLLTVYVFFMLDMLWSPFWLVIKTIFIPLIISIFISYLLLPVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EWLHGKGLPRTLSILVIYVLFFGGIGWALYKGVPVLIVQLTDLSENIPMFAETYNGLLLH
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCEEEE
VHNHTDDWPDGMHHRIDKMIRQTEAFFAGTIEGAISGIRNVLDYFLIAATIPFLVFYMVK
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIELMKKTVWYLTPKSWRKRGSAFLRDVDDSLGDYIRGQLLVCLILGVIAGISFWVFGLP
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YPLILGLISGVTNVIPYFGPFIGAVPALLIAMTISVKAVLVVVITVFILQFMEGNILSPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
IVGRSLKMHPVVIMLALLAGGELAGIVGMILAVPATAVLKVMMIHFLRMRTEH
HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MLQKPVQLLLWVAICLLVLLTVYVFFMLDMLWSPFWLVIKTIFIPLIISIFISYLLLPVT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EWLHGKGLPRTLSILVIYVLFFGGIGWALYKGVPVLIVQLTDLSENIPMFAETYNGLLLH
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCEEEE
VHNHTDDWPDGMHHRIDKMIRQTEAFFAGTIEGAISGIRNVLDYFLIAATIPFLVFYMVK
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIELMKKTVWYLTPKSWRKRGSAFLRDVDDSLGDYIRGQLLVCLILGVIAGISFWVFGLP
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YPLILGLISGVTNVIPYFGPFIGAVPALLIAMTISVKAVLVVVITVFILQFMEGNILSPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
IVGRSLKMHPVVIMLALLAGGELAGIVGMILAVPATAVLKVMMIHFLRMRTEH
HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377