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The map label for this gene is yrhP

Identifier: 16079764

GI number: 16079764

Start: 2768042

End: 2768674

Strand: Reverse

Name: yrhP

Synonym: BSU27100

Alternate gene names: 16079764

Gene position: 2768674-2768042 (Counterclockwise)

Preceding gene: 16079770

Following gene: 255767624

Centisome position: 65.68

GC content: 37.28

Gene sequence:

>633_bases
ATGCACAGCTTACTCGCATACATACCGATCGCTGCCATGATGGTTATCATACCGGGGGCAGATACGATGCTTGTGATGAA
AAATACGCTTAGGTATGGTCCGAAAGCCGGCCGTTATAACATTCTCGGATTGGCGACAGGACTTTCCTTTTGGACGGTGA
TTGCCATTTTAGGATTATCAGTGGTAATCGCAAAGTCAGTGATTCTTTTCACAACGATCAAATATTTGGGAGCGGCATAC
TTAATTTATTTAGGTGTAAAAAGTTTTTTTGCTAAAAGTATGTTTTCGTTAGATGACATGCAATCCCAAGCAAAAAATAT
GGCAAGTTCTCCGAAACGTTATTATAAAACTTCCTTTATGCAGGGATCACTCAGTAACATTCTCAATCCTAAAACTGTTT
TGGTGTATGTTACAATCATGCCCCAATTTATCAATTTGAACGGAAATATAAACCAGCAGCTCATCATTTTAGCTTCAATC
CTAACCTTATTAGCGGTGTTGTGGTTCCTGTTTCTTGTTTATATTATTGATTACGCAAAAAAATGGATGAAAAACTCGAA
GTTCCAGAAAGTGTTTCAAAAAATTACCGGAATAATATTAGTAGGTTTCGGCATCAAAACTGGTTTGAGTTAA

Upstream 100 bases:

>100_bases
AATCATATTGATTTATTCCAAACGCATTGATACACTTTTATAAGTAGTTACTTTTGTAGTCACTATATGATTGAGGGGAT
TTTTAAAGGGGGAGAGAACA

Downstream 100 bases:

>100_bases
CACTTAAATGAAGTGAATGAAATTTGAAACCAAAGTTTAATTTAGTGTTTGACACATATAAAAAGACAAGGGAGTGAGTA
TCCCTTGTCTTTTTTTTATT

Product: efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MHSLLAYIPIAAMMVIIPGADTMLVMKNTLRYGPKAGRYNILGLATGLSFWTVIAILGLSVVIAKSVILFTTIKYLGAAY
LIYLGVKSFFAKSMFSLDDMQSQAKNMASSPKRYYKTSFMQGSLSNILNPKTVLVYVTIMPQFINLNGNINQQLIILASI
LTLLAVLWFLFLVYIIDYAKKWMKNSKFQKVFQKITGIILVGFGIKTGLS

Sequences:

>Translated_210_residues
MHSLLAYIPIAAMMVIIPGADTMLVMKNTLRYGPKAGRYNILGLATGLSFWTVIAILGLSVVIAKSVILFTTIKYLGAAY
LIYLGVKSFFAKSMFSLDDMQSQAKNMASSPKRYYKTSFMQGSLSNILNPKTVLVYVTIMPQFINLNGNINQQLIILASI
LTLLAVLWFLFLVYIIDYAKKWMKNSKFQKVFQKITGIILVGFGIKTGLS
>Mature_210_residues
MHSLLAYIPIAAMMVIIPGADTMLVMKNTLRYGPKAGRYNILGLATGLSFWTVIAILGLSVVIAKSVILFTTIKYLGAAY
LIYLGVKSFFAKSMFSLDDMQSQAKNMASSPKRYYKTSFMQGSLSNILNPKTVLVYVTIMPQFINLNGNINQQLIILASI
LTLLAVLWFLFLVYIIDYAKKWMKNSKFQKVFQKITGIILVGFGIKTGLS

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family

Homologues:

Organism=Escherichia coli, GI1788099, Length=202, Percent_Identity=30.6930693069307, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI48994979, Length=192, Percent_Identity=28.125, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786522, Length=189, Percent_Identity=25.3968253968254, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI48994978, Length=205, Percent_Identity=25.8536585365854, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRHP_BACSU (O05406)

Other databases:

- EMBL:   AL009126
- EMBL:   U93874
- PIR:   F69975
- RefSeq:   NP_390588.1
- ProteinModelPortal:   O05406
- EnsemblBacteria:   EBBACT00000003835
- GeneID:   937592
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU27100
- NMPDR:   fig|224308.1.peg.2713
- GenoList:   BSU27100
- GeneTree:   EBGT00050000002504
- HOGENOM:   HBG759042
- OMA:   ANTRPTH
- PhylomeDB:   O05406
- ProtClustDB:   CLSK237171
- BioCyc:   BSUB:BSU27100-MONOMER
- InterPro:   IPR004778
- InterPro:   IPR001123
- TIGRFAMs:   TIGR00949

Pfam domain/function: PF01810 LysE

EC number: NA

Molecular weight: Translated: 23390; Mature: 23390

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1143b364)-; HASH(0x10b37e5c)-; HASH(0xe01d168)-; HASH(0x114b9fe4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSLLAYIPIAAMMVIIPGADTMLVMKNTLRYGPKAGRYNILGLATGLSFWTVIAILGLS
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
VVIAKSVILFTTIKYLGAAYLIYLGVKSFFAKSMFSLDDMQSQAKNMASSPKRYYKTSFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
QGSLSNILNPKTVLVYVTIMPQFINLNGNINQQLIILASILTLLAVLWFLFLVYIIDYAK
HHHHHHHCCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KWMKNSKFQKVFQKITGIILVGFGIKTGLS
HHHCCCHHHHHHHHHHHHHHEECCHHCCCH
>Mature Secondary Structure
MHSLLAYIPIAAMMVIIPGADTMLVMKNTLRYGPKAGRYNILGLATGLSFWTVIAILGLS
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
VVIAKSVILFTTIKYLGAAYLIYLGVKSFFAKSMFSLDDMQSQAKNMASSPKRYYKTSFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
QGSLSNILNPKTVLVYVTIMPQFINLNGNINQQLIILASILTLLAVLWFLFLVYIIDYAK
HHHHHHHCCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KWMKNSKFQKVFQKITGIILVGFGIKTGLS
HHHCCCHHHHHHHHHHHHHHEECCHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178