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The map label for this gene is yrkD

Identifier: 16079708

GI number: 16079708

Start: 2713949

End: 2714140

Strand: Reverse

Name: yrkD

Synonym: BSU26550

Alternate gene names: 16079708

Gene position: 2714140-2713949 (Counterclockwise)

Preceding gene: 16079709

Following gene: 16079707

Centisome position: 64.38

GC content: 40.1

Gene sequence:

>192_bases
ATGATGGAACAAGGAAAAGATTGTAGAGAGGTTGTGACCCAATTAGCAGCTTCCCGTAATGCGATCGATCGAGCGATGGG
TTTAATTGTGAGCACAAACCTTGAACATTGTGTTCGTGAAAGTTTAGAAAAAGGCGAAGACACACAAAATTTAGTAAAAG
AAGCAGTCGACTTATTGGTAAAGAGCCGATAA

Upstream 100 bases:

>100_bases
AAATAAATGAAAGAAAGGATTTCATTGATATATGGAGTATGATCAAAAGATTAAAAACCGCTTACGACGGATTGAAGGAC
AAATTAAAGGTGTATTGACT

Downstream 100 bases:

>100_bases
AAATTCATCAACCTAAGGTTGACGAATTTTTATATGCGTTATATTATACCCCCTATGGTATTTAAAGAGTTGAATAAAAG
CAGATCTTTCGAAAAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MMEQGKDCREVVTQLAASRNAIDRAMGLIVSTNLEHCVRESLEKGEDTQNLVKEAVDLLVKSR

Sequences:

>Translated_63_residues
MMEQGKDCREVVTQLAASRNAIDRAMGLIVSTNLEHCVRESLEKGEDTQNLVKEAVDLLVKSR
>Mature_63_residues
MMEQGKDCREVVTQLAASRNAIDRAMGLIVSTNLEHCVRESLEKGEDTQNLVKEAVDLLVKSR

Specific function: Unknown

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YRKD_BACSU (P54431)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   B69976
- RefSeq:   NP_390532.1
- ProteinModelPortal:   P54431
- SMR:   P54431
- EnsemblBacteria:   EBBACT00000001714
- GeneID:   937650
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26550
- NMPDR:   fig|224308.1.peg.2657
- GenoList:   BSU26550
- GeneTree:   EBGT00050000002726
- HOGENOM:   HBG661347
- OMA:   EKECKDI
- BioCyc:   BSUB:BSU26550-MONOMER
- InterPro:   IPR003735

Pfam domain/function: PF02583 DUF156

EC number: NA

Molecular weight: Translated: 7030; Mature: 7030

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEQGKDCREVVTQLAASRNAIDRAMGLIVSTNLEHCVRESLEKGEDTQNLVKEAVDLLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
KSR
CCC
>Mature Secondary Structure
MMEQGKDCREVVTQLAASRNAIDRAMGLIVSTNLEHCVRESLEKGEDTQNLVKEAVDLLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
KSR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377