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The map label for this gene is yqaG

Identifier: 16079685

GI number: 16079685

Start: 2697673

End: 2698242

Strand: Reverse

Name: yqaG

Synonym: BSU26320

Alternate gene names: 16079685

Gene position: 2698242-2697673 (Counterclockwise)

Preceding gene: 16079686

Following gene: 16079684

Centisome position: 64.01

GC content: 42.81

Gene sequence:

>570_bases
ATGGAGAACAACCCATACAATATGCGTAATTTACCGCAGATTATGCGTAGTGCCCGTAAGGCTGCAGGTCTTTCACAATA
CCAAATCGGCAAGTTAATCGGAGGTAAGGATCAAAGGTATGTTTCAGATGTTGAAAATGGACTTGCCAAGCTTACTCCAG
AGTTATGTATTAAATGGTTTGAGAAGTGCGCTGCCTATGAACATATTGATCTTGTACATTACTTATTCAAACTTCATCCT
ACAGCCGCTGCTCCTATTGATCCGGCACTCAATGAATGTGCAAGTAATGCGGTGATTAATATGGTTCACCAATTGGAGGA
AGCACTGCAAGCAACCAAACATTTAGCCCGTTGGCTCACGGATAACCGACCAGGTAAAACAGAGGAGCTGCCGATGGCCG
ATATTAAGCAGATTTTTGATTTGATTGCGGCTAACAAAACATTGATTTATTCACTTGTTCGTACTCACGGGTTGAAAATG
CAGGAACTTGCAGATAGATGGACGCGGAAAGCTCTAGTTGATCAAGTTGCTATGGCAAAACAAGAAGGAAGGCAGGCGGT
TTCAGTATGA

Upstream 100 bases:

>100_bases
CAAAAAAATAAAAAGGAATCAGCCTAAGTCATTTATAAACAGCATGGTCTTTCAACTTCAATTTTAAAACTAAAAACCTA
ATATAACAGGAGGCAAACAT

Downstream 100 bases:

>100_bases
ATACTAATCATTTCTTGAAGGCAGATGTTCCTATCGCAAAAAGAAAAATCGAATCAGCAGAAGAGCTATCAATCATGCTG
TCAGAGGCATTACGTGATGG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MENNPYNMRNLPQIMRSARKAAGLSQYQIGKLIGGKDQRYVSDVENGLAKLTPELCIKWFEKCAAYEHIDLVHYLFKLHP
TAAAPIDPALNECASNAVINMVHQLEEALQATKHLARWLTDNRPGKTEELPMADIKQIFDLIAANKTLIYSLVRTHGLKM
QELADRWTRKALVDQVAMAKQEGRQAVSV

Sequences:

>Translated_189_residues
MENNPYNMRNLPQIMRSARKAAGLSQYQIGKLIGGKDQRYVSDVENGLAKLTPELCIKWFEKCAAYEHIDLVHYLFKLHP
TAAAPIDPALNECASNAVINMVHQLEEALQATKHLARWLTDNRPGKTEELPMADIKQIFDLIAANKTLIYSLVRTHGLKM
QELADRWTRKALVDQVAMAKQEGRQAVSV
>Mature_189_residues
MENNPYNMRNLPQIMRSARKAAGLSQYQIGKLIGGKDQRYVSDVENGLAKLTPELCIKWFEKCAAYEHIDLVHYLFKLHP
TAAAPIDPALNECASNAVINMVHQLEEALQATKHLARWLTDNRPGKTEELPMADIKQIFDLIAANKTLIYSLVRTHGLKM
QELADRWTRKALVDQVAMAKQEGRQAVSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQAG_BACSU (P45904)

Other databases:

- EMBL:   D32216
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   F69944
- RefSeq:   NP_390509.1
- ProteinModelPortal:   P45904
- EnsemblBacteria:   EBBACT00000003026
- GeneID:   937671
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26320
- NMPDR:   fig|224308.1.peg.2634
- GenoList:   BSU26320
- GeneTree:   EBGT00050000005279
- ProtClustDB:   CLSK887619
- BioCyc:   BSUB:BSU26320-MONOMER
- GO:   GO:0006350
- InterPro:   IPR001387
- InterPro:   IPR010982
- SMART:   SM00530

Pfam domain/function: PF01381 HTH_3; SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 21352; Mature: 21352

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNPYNMRNLPQIMRSARKAAGLSQYQIGKLIGGKDQRYVSDVENGLAKLTPELCIKWF
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHH
EKCAAYEHIDLVHYLFKLHPTAAAPIDPALNECASNAVINMVHQLEEALQATKHLARWLT
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNRPGKTEELPMADIKQIFDLIAANKTLIYSLVRTHGLKMQELADRWTRKALVDQVAMAK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QEGRQAVSV
HHHHHHCCC
>Mature Secondary Structure
MENNPYNMRNLPQIMRSARKAAGLSQYQIGKLIGGKDQRYVSDVENGLAKLTPELCIKWF
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHH
EKCAAYEHIDLVHYLFKLHPTAAAPIDPALNECASNAVINMVHQLEEALQATKHLARWLT
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNRPGKTEELPMADIKQIFDLIAANKTLIYSLVRTHGLKMQELADRWTRKALVDQVAMAK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QEGRQAVSV
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895