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The map label for this gene is yqaN

Identifier: 16079678

GI number: 16079678

Start: 2692933

End: 2693361

Strand: Reverse

Name: yqaN

Synonym: BSU26250

Alternate gene names: 16079678

Gene position: 2693361-2692933 (Counterclockwise)

Preceding gene: 255767607

Following gene: 16079677

Centisome position: 63.89

GC content: 42.42

Gene sequence:

>429_bases
TTGGATTGCATTAAGTTCACTGTTTATGGTGAGCCAGTCGCACAAGGAAGGCCGCGTGGATCAATACGAAATGGGAAGGT
GCATATGCGTGATCCAGCGAAATCAAAGTATTTCAAACAGTATGTGGCATTGGTTGCGTCTCAGCATCGACCAGAAACAA
TTATTACTGGTCCTGTCTCAATGGATGTCAAAGTGTACAGACCAATGCCTAAGTCAGTTTCAAACTCAAAAAAGAAGAAA
GAGAAAGCTGAAAAGGGCCTTCTGCGGCCGACTACAAAGCCCGACGTTGATAATTATGTAAAGGGCGTGAAAGATGCTTT
GAATCATCTGATATACAAAGATGATAGTCAGGTTGTGGATTTGAAAGTCAGTAAGTTTTATAGCGAAGAGCCAAGGGTGG
AAGTCATGATAAGAGAGGTTTCTGCCTAA

Upstream 100 bases:

>100_bases
CTTAAAGCAGTCGTGTCTCTGCTGATAATTTTACTTTCTGCACCGAGAATAGAAAAAGAAATTAAGTTATGGGAACAGCT
TGACGGGAGGTAAAGAACAG

Downstream 100 bases:

>100_bases
AAATAAAAAACACCGAAGCGCTTAGCCTCAGTGTTCTTGATATGAACTGGTACTTCTATCATAACATAGGGGGCGCTTTG
AGTGTACAATCCAAGAGAAA

Product: Holliday junction resolvase; skin element

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MDCIKFTVYGEPVAQGRPRGSIRNGKVHMRDPAKSKYFKQYVALVASQHRPETIITGPVSMDVKVYRPMPKSVSNSKKKK
EKAEKGLLRPTTKPDVDNYVKGVKDALNHLIYKDDSQVVDLKVSKFYSEEPRVEVMIREVSA

Sequences:

>Translated_142_residues
MDCIKFTVYGEPVAQGRPRGSIRNGKVHMRDPAKSKYFKQYVALVASQHRPETIITGPVSMDVKVYRPMPKSVSNSKKKK
EKAEKGLLRPTTKPDVDNYVKGVKDALNHLIYKDDSQVVDLKVSKFYSEEPRVEVMIREVSA
>Mature_142_residues
MDCIKFTVYGEPVAQGRPRGSIRNGKVHMRDPAKSKYFKQYVALVASQHRPETIITGPVSMDVKVYRPMPKSVSNSKKKK
EKAEKGLLRPTTKPDVDNYVKGVKDALNHLIYKDDSQVVDLKVSKFYSEEPRVEVMIREVSA

Specific function: Unknown

COG id: COG4570

COG function: function code L; Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQAN_BACSU (P45911)

Other databases:

- EMBL:   D32216
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   E69945
- RefSeq:   NP_390502.1
- ProteinModelPortal:   P45911
- SMR:   P45911
- EnsemblBacteria:   EBBACT00000001276
- GeneID:   937694
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26250
- NMPDR:   fig|224308.1.peg.2627
- GenoList:   BSU26250
- GeneTree:   EBGT00050000006084
- HOGENOM:   HBG698001
- OMA:   ECASING
- ProtClustDB:   CLSK248457
- BioCyc:   BSUB:BSU26250-MONOMER
- InterPro:   IPR008822
- Gene3D:   G3DSA:3.30.1330.70

Pfam domain/function: PF05866 RusA; SSF103084 RusA-like

EC number: NA

Molecular weight: Translated: 16125; Mature: 16125

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCIKFTVYGEPVAQGRPRGSIRNGKVHMRDPAKSKYFKQYVALVASQHRPETIITGPVS
CCCEEEEEECCHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCC
MDVKVYRPMPKSVSNSKKKKEKAEKGLLRPTTKPDVDNYVKGVKDALNHLIYKDDSQVVD
CCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCEEE
LKVSKFYSEEPRVEVMIREVSA
EEHHHHCCCCCCEEEEEEECCC
>Mature Secondary Structure
MDCIKFTVYGEPVAQGRPRGSIRNGKVHMRDPAKSKYFKQYVALVASQHRPETIITGPVS
CCCEEEEEECCHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCC
MDVKVYRPMPKSVSNSKKKKEKAEKGLLRPTTKPDVDNYVKGVKDALNHLIYKDDSQVVD
CCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCEEE
LKVSKFYSEEPRVEVMIREVSA
EEHHHHCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895