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The map label for this gene is yqbP

Identifier: 16079655

GI number: 16079655

Start: 2672054

End: 2672713

Strand: Reverse

Name: yqbP

Synonym: BSU26020

Alternate gene names: 16079655

Gene position: 2672713-2672054 (Counterclockwise)

Preceding gene: 255767599

Following gene: 16079654

Centisome position: 63.4

GC content: 38.79

Gene sequence:

>660_bases
TTGACTAAATCCATATATGAATTCTGGATTTCACAAGGGAAGGACAAGCTGCGGCTTCCGGTCCTTCCTGAACAAATTGA
TATATCCAACACAATTCAAAATGAATCAGTAAAAGTGGCTAGTTTTGGGGAGATCACTTTTATTGATAAACCGGGAGCGA
AAGAAATTTCGTTCTCTTCTTTTTTTCCAAAGAAACACAGCCCGCTTGCTGAGTATAAGGGATTTCCTTCTCCTGAAAAT
GCTATTGCAAAGATCGAGAAATGGGTGAAATCTAAAAAGCCGGTTCAATTCTTAATTACTGGAACGAAAATTAATTTAAC
TTGCAGTATCGAGGTTTTTTCTTATACAGAGGGCCAAAAAGATATAGGTGATCGTGATTATGAAATAAAGCTGAAGGAAT
ACAAAACTGCTTCGCCGCGGAAGATCAAGCAGAAGAAAAAGACGAAGAAGAAACGGCCATCTAAATCAGCTCCTAAAACA
TACACCGTTAAGAAAGGCGATACACTGTGGGACCTTGCCGGCAAATTTTATGGAGACAGTACAAAATGGCGCAAGATATG
GAAAGTCAATAAAAAGGCTATGATCAAACGAAGCAAACGGAATATAAGACAGCCAGGACACTGGATCTTTCCTGGGCAAA
AATTAAAAATACCGCAGTAA

Upstream 100 bases:

>100_bases
AATGACCAAGACATGAACAGTCTTGTAGCTAAGATTAAGCAGGCCCTTGTCGATGAGCTTGAACAGGATATCAACATTGG
AACGAAGGGAGTCGTTGCTT

Downstream 100 bases:

>100_bases
GCAGGTGATGACATGATAGAACTTTTCGTCATTAAAGAAACGGAATGGCTTGAGCTGGTAACTGAAAGTGTTTCCCTCGA
AGGGCAACGGTATCAGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTKSIYEFWISQGKDKLRLPVLPEQIDISNTIQNESVKVASFGEITFIDKPGAKEISFSSFFPKKHSPLAEYKGFPSPEN
AIAKIEKWVKSKKPVQFLITGTKINLTCSIEVFSYTEGQKDIGDRDYEIKLKEYKTASPRKIKQKKKTKKKRPSKSAPKT
YTVKKGDTLWDLAGKFYGDSTKWRKIWKVNKKAMIKRSKRNIRQPGHWIFPGQKLKIPQ

Sequences:

>Translated_219_residues
MTKSIYEFWISQGKDKLRLPVLPEQIDISNTIQNESVKVASFGEITFIDKPGAKEISFSSFFPKKHSPLAEYKGFPSPEN
AIAKIEKWVKSKKPVQFLITGTKINLTCSIEVFSYTEGQKDIGDRDYEIKLKEYKTASPRKIKQKKKTKKKRPSKSAPKT
YTVKKGDTLWDLAGKFYGDSTKWRKIWKVNKKAMIKRSKRNIRQPGHWIFPGQKLKIPQ
>Mature_218_residues
TKSIYEFWISQGKDKLRLPVLPEQIDISNTIQNESVKVASFGEITFIDKPGAKEISFSSFFPKKHSPLAEYKGFPSPENA
IAKIEKWVKSKKPVQFLITGTKINLTCSIEVFSYTEGQKDIGDRDYEIKLKEYKTASPRKIKQKKKTKKKRPSKSAPKTY
TVKKGDTLWDLAGKFYGDSTKWRKIWKVNKKAMIKRSKRNIRQPGHWIFPGQKLKIPQ

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQBP_BACSU (P45932)

Other databases:

- EMBL:   D32216
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   C69948
- RefSeq:   NP_390479.1
- ProteinModelPortal:   P45932
- SMR:   P45932
- EnsemblBacteria:   EBBACT00000000838
- GeneID:   937756
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU26020
- NMPDR:   fig|224308.1.peg.2604
- GenoList:   BSU26020
- GeneTree:   EBGT00050000006390
- HOGENOM:   HBG428176
- OMA:   TLWHIAK
- ProtClustDB:   CLSK887132
- BioCyc:   BSUB:BSU26020-MONOMER
- InterPro:   IPR018392
- InterPro:   IPR002482
- SMART:   SM00257

Pfam domain/function: PF01476 LysM

EC number: NA

Molecular weight: Translated: 25331; Mature: 25200

Theoretical pI: Translated: 10.78; Mature: 10.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSIYEFWISQGKDKLRLPVLPEQIDISNTIQNESVKVASFGEITFIDKPGAKEISFSS
CCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCHHH
FFPKKHSPLAEYKGFPSPENAIAKIEKWVKSKKPVQFLITGTKINLTCSIEVFSYTEGQK
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEEEEEEECCCCC
DIGDRDYEIKLKEYKTASPRKIKQKKKTKKKRPSKSAPKTYTVKKGDTLWDLAGKFYGDS
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCC
TKWRKIWKVNKKAMIKRSKRNIRQPGHWIFPGQKLKIPQ
HHHHHHHHCCHHHHHHHHHHHCCCCCCEECCCCEEECCC
>Mature Secondary Structure 
TKSIYEFWISQGKDKLRLPVLPEQIDISNTIQNESVKVASFGEITFIDKPGAKEISFSS
CHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCHHH
FFPKKHSPLAEYKGFPSPENAIAKIEKWVKSKKPVQFLITGTKINLTCSIEVFSYTEGQK
CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEEEEEEECCCCC
DIGDRDYEIKLKEYKTASPRKIKQKKKTKKKRPSKSAPKTYTVKKGDTLWDLAGKFYGDS
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCC
TKWRKIWKVNKKAMIKRSKRNIRQPGHWIFPGQKLKIPQ
HHHHHHHHCCHHHHHHHHHHHCCCCCCEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895