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The map label for this gene is yqcF

Identifier: 16079640

GI number: 16079640

Start: 2662712

End: 2663290

Strand: Direct

Name: yqcF

Synonym: BSU25870

Alternate gene names: 16079640

Gene position: 2662712-2663290 (Clockwise)

Preceding gene: 16079639

Following gene: 16079658

Centisome position: 63.16

GC content: 35.41

Gene sequence:

>579_bases
ATGGGCGTAACACAAGAAAATAAAGTAATTGCTAGAACAGTTTTAGGAGCTTTTGGGGGGAAACCGAAGGTTACGAAATA
TTGGGATGATAACAAGAATAGCAGCATAGATATTTTATCGGTTAGTGACCAGCCTCAGGAAGGTATCACGTCATATTCAA
CTCTAGGTTTGTCGGATCATTCTATTAATTATGAGGTGAATGGCACTCCGTTGCGGATAGAAATCGTAGCTGCAATGGAG
TCAGCTTCAGACATATATGCTAATGTTTTATCAACTTGTGCCTTTAATATAATCAACTCAAATTTCACTTGTGCACCAGG
TGTTATTTTTAAAAATGTGATTAGTATGTATGATCAGGAAACCGACATGAAACATATTATGTTCGTTCCCCCATTTTTAT
GGGAGGAAGATTTAGAACTACTTGAATTTAGTAACAAAAATGTTACTTGGCTAATGGCTTTACCTATATCCGAAGGAGAA
TTGCAAGTAGCTGAAAAACACGGCTCAGATTATTTACAAGATCTTCTGGAATCAAAACAGATTGATATTTTTGATATAAA
GAGAGAATCTGTTGTTTAA

Upstream 100 bases:

>100_bases
ATCCAGACCACTATCAACCCGAATTACCTTCCTCCAATAGGAGTCATAAAGGGGAAGATATGACGGATGATTACTTTGGA
GATTAAGGAGAGATTGTCTA

Downstream 100 bases:

>100_bases
TGACTTTAATAAAGAAGAGTCACTTTATAAGCCCCTCTCAATGAGAAGGGCTTATTTTATTTAATTTGAAATCAGCTGCA
AATAATAGAAGAAAATGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MGVTQENKVIARTVLGAFGGKPKVTKYWDDNKNSSIDILSVSDQPQEGITSYSTLGLSDHSINYEVNGTPLRIEIVAAME
SASDIYANVLSTCAFNIINSNFTCAPGVIFKNVISMYDQETDMKHIMFVPPFLWEEDLELLEFSNKNVTWLMALPISEGE
LQVAEKHGSDYLQDLLESKQIDIFDIKRESVV

Sequences:

>Translated_192_residues
MGVTQENKVIARTVLGAFGGKPKVTKYWDDNKNSSIDILSVSDQPQEGITSYSTLGLSDHSINYEVNGTPLRIEIVAAME
SASDIYANVLSTCAFNIINSNFTCAPGVIFKNVISMYDQETDMKHIMFVPPFLWEEDLELLEFSNKNVTWLMALPISEGE
LQVAEKHGSDYLQDLLESKQIDIFDIKRESVV
>Mature_191_residues
GVTQENKVIARTVLGAFGGKPKVTKYWDDNKNSSIDILSVSDQPQEGITSYSTLGLSDHSINYEVNGTPLRIEIVAAMES
ASDIYANVLSTCAFNIINSNFTCAPGVIFKNVISMYDQETDMKHIMFVPPFLWEEDLELLEFSNKNVTWLMALPISEGEL
QVAEKHGSDYLQDLLESKQIDIFDIKRESVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQCF_BACSU (P45941)

Other databases:

- EMBL:   D32216
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   E69949
- RefSeq:   NP_390464.1
- ProteinModelPortal:   P45941
- EnsemblBacteria:   EBBACT00000000575
- GeneID:   937785
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25870
- NMPDR:   fig|224308.1.peg.2589
- GenoList:   BSU25870
- GeneTree:   EBGT00070000035941
- HOGENOM:   HBG422673
- OMA:   PVVHAYR
- ProtClustDB:   CLSK2301472
- BioCyc:   BSUB:BSU25870-MONOMER
- InterPro:   IPR020941

Pfam domain/function: PF05076 SUFU

EC number: NA

Molecular weight: Translated: 21477; Mature: 21345

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVTQENKVIARTVLGAFGGKPKVTKYWDDNKNSSIDILSVSDQPQEGITSYSTLGLSDH
CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEECCCCCC
SINYEVNGTPLRIEIVAAMESASDIYANVLSTCAFNIINSNFTCAPGVIFKNVISMYDQE
EEEEEECCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
TDMKHIMFVPPFLWEEDLELLEFSNKNVTWLMALPISEGELQVAEKHGSDYLQDLLESKQ
CCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEHHHCCHHHHHHHHHCCC
IDIFDIKRESVV
CEEEECCHHCCC
>Mature Secondary Structure 
GVTQENKVIARTVLGAFGGKPKVTKYWDDNKNSSIDILSVSDQPQEGITSYSTLGLSDH
CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEECCCCCC
SINYEVNGTPLRIEIVAAMESASDIYANVLSTCAFNIINSNFTCAPGVIFKNVISMYDQE
EEEEEECCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
TDMKHIMFVPPFLWEEDLELLEFSNKNVTWLMALPISEGELQVAEKHGSDYLQDLLESKQ
CCCCEEEECCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCEEEHHHCCHHHHHHHHHCCC
IDIFDIKRESVV
CEEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895