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The map label for this gene is yqeI

Identifier: 16079619

GI number: 16079619

Start: 2644346

End: 2644636

Strand: Reverse

Name: yqeI

Synonym: BSU25650

Alternate gene names: 16079619

Gene position: 2644636-2644346 (Counterclockwise)

Preceding gene: 255767590

Following gene: 16079618

Centisome position: 62.73

GC content: 39.52

Gene sequence:

>291_bases
ATGTTAACAGGTAAACAAAAACGTTTTTTGCGTTCAAAAGCGCATCATTTAACGCCGATTTTTCAAGTAGGTAAAGGCGG
AGTAAACGACAACATGATTAAACAAATTGCTGAGGCGCTTGAAGCGAGAGAGCTGATTAAAGTCAGCGTGCTTCAGAATT
GCGAAGAGGATAAAAACGATGTAGCGGAAGCTCTTGTAAAAGGAAGCCGCTCTCAATTGGTGCAGACAATCGGCAATACG
ATTGTGTTATATAAGGAATCAAAGGAAAATAAACAAATCGAGCTTCCTTAA

Upstream 100 bases:

>100_bases
TTGTTGAACAGGCAGCATTGTCTTTCCAATTGTGGACTGGACAAGAGCCTAATATTGAAAAAATGAGATCTATTGTAATA
GGAAAATTAGGAGGAACAGA

Downstream 100 bases:

>100_bases
AGGTGGTTGAAATGAAGAAAATCGGAATTTTCGGAGGCACGTTTGACCCTCCGCATAATGGTCACCTCTTAATGGCGAAT
GAGGTGCTGTACCAGGCGGG

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MLTGKQKRFLRSKAHHLTPIFQVGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDKNDVAEALVKGSRSQLVQTIGNT
IVLYKESKENKQIELP

Sequences:

>Translated_96_residues
MLTGKQKRFLRSKAHHLTPIFQVGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDKNDVAEALVKGSRSQLVQTIGNT
IVLYKESKENKQIELP
>Mature_96_residues
MLTGKQKRFLRSKAHHLTPIFQVGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDKNDVAEALVKGSRSQLVQTIGNT
IVLYKESKENKQIELP

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain

Homologues:

Organism=Escherichia coli, GI1789570, Length=95, Percent_Identity=41.0526315789474, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQEI_BACSU (P54454)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   E69951
- RefSeq:   NP_390443.1
- ProteinModelPortal:   P54454
- SMR:   P54454
- EnsemblBacteria:   EBBACT00000003517
- GeneID:   937813
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25650
- NMPDR:   fig|224308.1.peg.2568
- GenoList:   BSU25650
- GeneTree:   EBGT00050000001700
- HOGENOM:   HBG733875
- OMA:   YKESKEN
- PhylomeDB:   P54454
- ProtClustDB:   CLSK2516620
- BioCyc:   BSUB:BSU25650-MONOMER
- InterPro:   IPR001890
- InterPro:   IPR017924
- Gene3D:   G3DSA:3.30.110.60
- ProDom:   PD010559
- TIGRFAMs:   TIGR00253

Pfam domain/function: PF01985 CRS1_YhbY; SSF75471 CRS1_YhbY

EC number: NA

Molecular weight: Translated: 10759; Mature: 10759

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS51295 CRM; PS01301 UPF0044

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTGKQKRFLRSKAHHLTPIFQVGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDKND
CCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VAEALVKGSRSQLVQTIGNTIVLYKESKENKQIELP
HHHHHHCCCHHHHHHHHCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MLTGKQKRFLRSKAHHLTPIFQVGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDKND
CCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
VAEALVKGSRSQLVQTIGNTIVLYKESKENKQIELP
HHHHHHCCCHHHHHHHHCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377