Click here to switch to the map view.

The map label for this gene is yqfZ

Identifier: 16079561

GI number: 16079561

Start: 2588701

End: 2589000

Strand: Direct

Name: yqfZ

Synonym: BSU25060

Alternate gene names: 16079561

Gene position: 2588701-2589000 (Clockwise)

Preceding gene: 255767568

Following gene: 16079562

Centisome position: 61.41

GC content: 42.0

Gene sequence:

>300_bases
ATGAAGCGTCTCACCTTAGTATGCAGCATTGTTTTTATACTTTTTATTCTTTTTTATGACCTTAAAATTGGAACCATACC
CATTCAGGACCTCCCTGTCTATGAAGCATCAGCAAAAACGGCTGTACAAGAACCGGCTTATAAAACGGTGAAGGTAAAGC
CGGGTGATACGGTTATGTCGATAGTCGGATCAGCAGGTTCTCCGGATGACATTGTAAAGGATTTTGAAGCACTGAATCCA
AATGTGAAAGCTAACGCCATTCAAGCCGGAACAGCGTATAAATTCCCGGTCTACCCTTAA

Upstream 100 bases:

>100_bases
CTGTATAAAAACCGAGCATTCGCAGTCTCTTTTCTTTTGTCATGAATCGAAATGGACAAGCATACTATGGTATAAAATTT
CGTATGCGGGAGGAAAAGCG

Downstream 100 bases:

>100_bases
TTTAACGTTAATTTCTTGTCAGTTCGGCGAAGACACTGTTACAATGTAATTTGTAAAATAAATTCACATAAACCATACTA
GAATTGTTATATCTAGAAGC

Product: factor involved in motility

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MKRLTLVCSIVFILFILFYDLKIGTIPIQDLPVYEASAKTAVQEPAYKTVKVKPGDTVMSIVGSAGSPDDIVKDFEALNP
NVKANAIQAGTAYKFPVYP

Sequences:

>Translated_99_residues
MKRLTLVCSIVFILFILFYDLKIGTIPIQDLPVYEASAKTAVQEPAYKTVKVKPGDTVMSIVGSAGSPDDIVKDFEALNP
NVKANAIQAGTAYKFPVYP
>Mature_99_residues
MKRLTLVCSIVFILFILFYDLKIGTIPIQDLPVYEASAKTAVQEPAYKTVKVKPGDTVMSIVGSAGSPDDIVKDFEALNP
NVKANAIQAGTAYKFPVYP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall. Membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQFZ_BACSU (P54483)

Other databases:

- EMBL:   AF421961
- EMBL:   D84432
- EMBL:   AL009126
- PIR:   D69955
- RefSeq:   NP_390385.1
- ProteinModelPortal:   P54483
- EnsemblBacteria:   EBBACT00000002965
- GeneID:   938027
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25060
- NMPDR:   fig|224308.1.peg.2510
- GenoList:   BSU25060
- GeneTree:   EBGT00050000002160
- HOGENOM:   HBG345593
- OMA:   IQAGTAY
- ProtClustDB:   CLSK887585
- BioCyc:   BSUB:BSU25060-MONOMER
- InterPro:   IPR002482
- InterPro:   IPR020506
- ProDom:   PD067165
- SMART:   SM00257

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10766; Mature: 10766

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xdc58fb8)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLTLVCSIVFILFILFYDLKIGTIPIQDLPVYEASAKTAVQEPAYKTVKVKPGDTVMS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCHHHH
IVGSAGSPDDIVKDFEALNPNVKANAIQAGTAYKFPVYP
HHCCCCCCHHHHHHHHHCCCCCCCCEEECCCEEECCCCH
>Mature Secondary Structure
MKRLTLVCSIVFILFILFYDLKIGTIPIQDLPVYEASAKTAVQEPAYKTVKVKPGDTVMS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCHHHH
IVGSAGSPDDIVKDFEALNPNVKANAIQAGTAYKFPVYP
HHCCCCCCHHHHHHHHHCCCCCCCCEEECCCEEECCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377