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The map label for this gene is yqgC

Identifier: 16079558

GI number: 16079558

Start: 2586221

End: 2586703

Strand: Reverse

Name: yqgC

Synonym: BSU25030

Alternate gene names: 16079558

Gene position: 2586703-2586221 (Counterclockwise)

Preceding gene: 255767569

Following gene: 255767567

Centisome position: 61.36

GC content: 42.65

Gene sequence:

>483_bases
ATGGATATGTTGTATTGGCTGTTGATTGCAGCGGTTTTTATCATTGCCTTTATCGGGCTGGTGTATCCTGTTATTCCTAG
CGTAGTATTTATTGTTGCCGGATTTGTATTGTACGGATTTTTATTTTCATTCAGTCCGTATTCTTATATGTTCTGGCTTG
TTGAGGCAGTTTTTGCCGCAGTATTATTCGCAGCAGATTACGTGTCGAATCTGCTTGGAGTAAAAAGGTTCGGAGGAAGC
AAAGCTGCCATATGGGGAAGCACGATCGGTTTATTAATCGGGCCTTTTGTCATTCCGGTTGCAGGGATCATATTGGGGCC
GTTTATCGGGGCTGTTTGCGCAGAACTTATCGTCCATCAGAAGGACTTAAAGTCAGCGTTTAAAATTGGCCTCGGCTCAC
TCATTGGTTTTTTAACAGGGGTTATTGCAAAGGGCATCATACAGCTTTTGATGATCGGTTACTTTTTATGGACGGTCCTA
TAA

Upstream 100 bases:

>100_bases
TTCCTAGCTAAACTAATATATGTTGCTTATTGTATCGTTGCATGCGTGTGAATACAAGGAAGACATGAAGAAGACAGAGT
AAAATGGGAGGATGGAAGCT

Downstream 100 bases:

>100_bases
GAAATGCTGGCGGCAGGTTTAATGGGGCAGATTATCGGTTAAAGTGAAATATGTCCGCTGAAATGAGCCAAATCGTGAGC
TTTTTCATTGATTACAAAGC

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MDMLYWLLIAAVFIIAFIGLVYPVIPSVVFIVAGFVLYGFLFSFSPYSYMFWLVEAVFAAVLFAADYVSNLLGVKRFGGS
KAAIWGSTIGLLIGPFVIPVAGIILGPFIGAVCAELIVHQKDLKSAFKIGLGSLIGFLTGVIAKGIIQLLMIGYFLWTVL

Sequences:

>Translated_160_residues
MDMLYWLLIAAVFIIAFIGLVYPVIPSVVFIVAGFVLYGFLFSFSPYSYMFWLVEAVFAAVLFAADYVSNLLGVKRFGGS
KAAIWGSTIGLLIGPFVIPVAGIILGPFIGAVCAELIVHQKDLKSAFKIGLGSLIGFLTGVIAKGIIQLLMIGYFLWTVL
>Mature_160_residues
MDMLYWLLIAAVFIIAFIGLVYPVIPSVVFIVAGFVLYGFLFSFSPYSYMFWLVEAVFAAVLFAADYVSNLLGVKRFGGS
KAAIWGSTIGLLIGPFVIPVAGIILGPFIGAVCAELIVHQKDLKSAFKIGLGSLIGFLTGVIAKGIIQLLMIGYFLWTVL

Specific function: Unknown

COG id: COG2839

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQGC_BACSU (P54486)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   G69955
- RefSeq:   NP_390382.1
- ProteinModelPortal:   P54486
- EnsemblBacteria:   EBBACT00000002291
- GeneID:   938138
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU25030
- NMPDR:   fig|224308.1.peg.2507
- GenoList:   BSU25030
- GeneTree:   EBGT00050000002853
- HOGENOM:   HBG729653
- OMA:   ACFIVSF
- ProtClustDB:   CLSK887583
- BioCyc:   BSUB:BSU25030-MONOMER
- InterPro:   IPR007403

Pfam domain/function: PF04306 DUF456

EC number: NA

Molecular weight: Translated: 17295; Mature: 17295

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10a4fc98)-; HASH(0x10eff044)-; HASH(0x10ec0794)-; HASH(0x10842810)-; HASH(0x10b85810)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMLYWLLIAAVFIIAFIGLVYPVIPSVVFIVAGFVLYGFLFSFSPYSYMFWLVEAVFAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VLFAADYVSNLLGVKRFGGSKAAIWGSTIGLLIGPFVIPVAGIILGPFIGAVCAELIVHQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDLKSAFKIGLGSLIGFLTGVIAKGIIQLLMIGYFLWTVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
>Mature Secondary Structure
MDMLYWLLIAAVFIIAFIGLVYPVIPSVVFIVAGFVLYGFLFSFSPYSYMFWLVEAVFAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VLFAADYVSNLLGVKRFGGSKAAIWGSTIGLLIGPFVIPVAGIILGPFIGAVCAELIVHQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDLKSAFKIGLGSLIGFLTGVIAKGIIQLLMIGYFLWTVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377