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The map label for this gene is yqhR

Identifier: 16079504

GI number: 16079504

Start: 2540288

End: 2540824

Strand: Reverse

Name: yqhR

Synonym: BSU24480

Alternate gene names: 16079504

Gene position: 2540824-2540288 (Counterclockwise)

Preceding gene: 16079507

Following gene: 16079503

Centisome position: 60.27

GC content: 41.15

Gene sequence:

>537_bases
ATGATGACAAGCGAAAAAGATACAGAACAAAATGAAGAATTGAATGAGAAGCAAAAGCCGCCTGTTTCAATGGCCGGCAG
GGTGGCGGCAACAGGTTTTTGCGGAGGCGTACTTTGGAGTTTCGTTGCTTATATCGCATATTTGTTTCATTTTTCCGAAA
TCAGCCCGAATATGATATTGCAGCCGTTTGTACTCGGAGAGTGGAAAAAACATGGGCTGGGAACGGTAATCAGCATCATT
TTGATTGGAGTAATTTCAATTGGCGCAGCATTTCTTTATTTTCTTCTATTGAAACGTTTAAAAACAATGTGGCCGGGTAT
TTTATACGGCTTGGTGCTTTGGCTGCTCGTGTTTTTTGTTTTTAATCCGATTTTTCCAGATGTGCGCACGGTGACCGAAC
TGACATCAGATACAATTATTACGACCATTTGCATTTATTTGCTTTACGGGCTGTTTGTCGGGTATTCTATTTCATTTGAA
TACAATGAGCTGAATTCGGAAAAGCTTGCACGTGCGCTGGGAATGCATAGAGAATAG

Upstream 100 bases:

>100_bases
CATTATACCCGTTATTTTCAAATTTTACTCGCAGCTGCCAAAAAGTGTGAGCTTTTTTATTGACATTTCATTTTTTGGGC
ACACTTTAACTGGAGGTGCC

Downstream 100 bases:

>100_bases
TGTATAATCCTTTTCCAGTATGATAAAATGTTCACGAGAAGTGAACATTTTTTACATGAGAAACCCTCGCGAAAAGGAGA
GATTGTGTGCCTCATTTTTT

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MMTSEKDTEQNEELNEKQKPPVSMAGRVAATGFCGGVLWSFVAYIAYLFHFSEISPNMILQPFVLGEWKKHGLGTVISII
LIGVISIGAAFLYFLLLKRLKTMWPGILYGLVLWLLVFFVFNPIFPDVRTVTELTSDTIITTICIYLLYGLFVGYSISFE
YNELNSEKLARALGMHRE

Sequences:

>Translated_178_residues
MMTSEKDTEQNEELNEKQKPPVSMAGRVAATGFCGGVLWSFVAYIAYLFHFSEISPNMILQPFVLGEWKKHGLGTVISII
LIGVISIGAAFLYFLLLKRLKTMWPGILYGLVLWLLVFFVFNPIFPDVRTVTELTSDTIITTICIYLLYGLFVGYSISFE
YNELNSEKLARALGMHRE
>Mature_178_residues
MMTSEKDTEQNEELNEKQKPPVSMAGRVAATGFCGGVLWSFVAYIAYLFHFSEISPNMILQPFVLGEWKKHGLGTVISII
LIGVISIGAAFLYFLLLKRLKTMWPGILYGLVLWLLVFFVFNPIFPDVRTVTELTSDTIITTICIYLLYGLFVGYSISFE
YNELNSEKLARALGMHRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQHR_BACSU (P54516)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   A69960
- RefSeq:   NP_390328.1
- ProteinModelPortal:   P54516
- EnsemblBacteria:   EBBACT00000000496
- GeneID:   938555
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU24480
- NMPDR:   fig|224308.1.peg.2452
- GenoList:   BSU24480
- GeneTree:   EBGT00050000001439
- HOGENOM:   HBG337550
- OMA:   GYSISFE
- ProtClustDB:   CLSK873431
- BioCyc:   BSUB:BSU24480-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20160; Mature: 20160

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10c00e24)-; HASH(0x10c396b4)-; HASH(0x10a64178)-; HASH(0x10c390b0)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTSEKDTEQNEELNEKQKPPVSMAGRVAATGFCGGVLWSFVAYIAYLFHFSEISPNMIL
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QPFVLGEWKKHGLGTVISIILIGVISIGAAFLYFLLLKRLKTMWPGILYGLVLWLLVFFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNPIFPDVRTVTELTSDTIITTICIYLLYGLFVGYSISFEYNELNSEKLARALGMHRE
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCH
>Mature Secondary Structure
MMTSEKDTEQNEELNEKQKPPVSMAGRVAATGFCGGVLWSFVAYIAYLFHFSEISPNMIL
CCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QPFVLGEWKKHGLGTVISIILIGVISIGAAFLYFLLLKRLKTMWPGILYGLVLWLLVFFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNPIFPDVRTVTELTSDTIITTICIYLLYGLFVGYSISFEYNELNSEKLARALGMHRE
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377