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The map label for this gene is ypbB

Identifier: 16079360

GI number: 16079360

Start: 2408405

End: 2409463

Strand: Reverse

Name: ypbB

Synonym: BSU23030

Alternate gene names: 16079360

Gene position: 2409463-2408405 (Counterclockwise)

Preceding gene: 16079362

Following gene: 16079359

Centisome position: 57.16

GC content: 45.04

Gene sequence:

>1059_bases
TTGTCATTAAATTACTTCGATATTATGGTTCTCGATTGTCTTTGCAAAATAAACGGGGAACGGTCGGGAAGCGCTGTTTT
TCACCTATTCAAAGGCAAGAGATCGTCACAGACCATTCAAGATGCCGGCTTATTTCAGACTGCAAAATACTTTGGAATGG
CGGCAAAATGTTCGAGAAGCGATATTTCTGCGTCGCTTGACAAGCTTGAAAAGCATTCATATCTCGCGCCAATGTCTGAA
TCAGATACATACAAAGTGACAGCCAGCGGCGCAGCAGTTTTGAGACATGCCCTTAGCGAGCGGCCTTGGCCCGTTCATTG
TCACGGCGCTCATTATCAGCAGGCTGCCGGCGTGCTTTGGAAAAGGCTTTCGCTGCTTGTGCAGGTCCTATCCCATAAAC
AGCAAGGGAGCAGGCAGTATATCCCTGTCACAAAGGATCATAAGACACTTCACTGGGTAAAGAAATACCTGTCCCGGCAT
ACGGATCATATAGAGATGGCAAAAAGCCTTTTTGCCATGCTTGAGGCGCATTTGAAAAAGATTGAAAACAAAGCAGCGCA
AATTTTTGTCTACTCCTTAACCTCGCACCATCGGATCGGTTATACGAGCAGGCAGCTTGCTGATACGCTGAAAGAAGACG
AATGGTATGTCTATATCATGTTTTGGGCTTCGGTACATTATTTTATTCATTCTCTTCCGGAGTGTGAAGATGCTTTGTTA
AAGGATCTCCTTTCTGATGTGCACTTAGATAATGCCCTGACAGAGTCGACGAGGAAAACATGGCAGATGGTCAAACAAGG
GTTTCCGATACAGCGAATTGCTGAAATCAGAAAGCTGAAAACAGCGACGATTGAAGACCACATTGTCGAGATTTCTCTCC
ATGAGCCTGCGTTTATGATTAATGACTATGTATCAGCAGAAGACCAGCTTCAAATCGCAGAGTTTGCCAAACGGATGCGG
ACGAATAAAATCAAACAAATTCGCGACGGGCTGGAACAGCGGTTCAGCTACTTTCAAATCAGACTGGCATTGACAAAGCA
GGTGCAGCAATATGACTAA

Upstream 100 bases:

>100_bases
CCCCTTAATGATGACTTTAAACGTCGATTTCTGTTTGAAATCTGTTAAAATAAAAAGAGCAAATCAACGATTTTTGTCAG
GAAGAATGTAGGTGGATAGG

Downstream 100 bases:

>100_bases
ATTACAGCAAACGTTATATCAGTTTTTTGGTTTTACTTCCTTTAAAAAAGGGCAGCAGGACATTATTGAAAGCATACTCA
GCGGGAAGGATACCATTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSLNYFDIMVLDCLCKINGERSGSAVFHLFKGKRSSQTIQDAGLFQTAKYFGMAAKCSRSDISASLDKLEKHSYLAPMSE
SDTYKVTASGAAVLRHALSERPWPVHCHGAHYQQAAGVLWKRLSLLVQVLSHKQQGSRQYIPVTKDHKTLHWVKKYLSRH
TDHIEMAKSLFAMLEAHLKKIENKAAQIFVYSLTSHHRIGYTSRQLADTLKEDEWYVYIMFWASVHYFIHSLPECEDALL
KDLLSDVHLDNALTESTRKTWQMVKQGFPIQRIAEIRKLKTATIEDHIVEISLHEPAFMINDYVSAEDQLQIAEFAKRMR
TNKIKQIRDGLEQRFSYFQIRLALTKQVQQYD

Sequences:

>Translated_352_residues
MSLNYFDIMVLDCLCKINGERSGSAVFHLFKGKRSSQTIQDAGLFQTAKYFGMAAKCSRSDISASLDKLEKHSYLAPMSE
SDTYKVTASGAAVLRHALSERPWPVHCHGAHYQQAAGVLWKRLSLLVQVLSHKQQGSRQYIPVTKDHKTLHWVKKYLSRH
TDHIEMAKSLFAMLEAHLKKIENKAAQIFVYSLTSHHRIGYTSRQLADTLKEDEWYVYIMFWASVHYFIHSLPECEDALL
KDLLSDVHLDNALTESTRKTWQMVKQGFPIQRIAEIRKLKTATIEDHIVEISLHEPAFMINDYVSAEDQLQIAEFAKRMR
TNKIKQIRDGLEQRFSYFQIRLALTKQVQQYD
>Mature_351_residues
SLNYFDIMVLDCLCKINGERSGSAVFHLFKGKRSSQTIQDAGLFQTAKYFGMAAKCSRSDISASLDKLEKHSYLAPMSES
DTYKVTASGAAVLRHALSERPWPVHCHGAHYQQAAGVLWKRLSLLVQVLSHKQQGSRQYIPVTKDHKTLHWVKKYLSRHT
DHIEMAKSLFAMLEAHLKKIENKAAQIFVYSLTSHHRIGYTSRQLADTLKEDEWYVYIMFWASVHYFIHSLPECEDALLK
DLLSDVHLDNALTESTRKTWQMVKQGFPIQRIAEIRKLKTATIEDHIVEISLHEPAFMINDYVSAEDQLQIAEFAKRMRT
NKIKQIRDGLEQRFSYFQIRLALTKQVQQYD

Specific function: Unknown

COG id: COG4955

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPBB_BACSU (P50728)

Other databases:

- EMBL:   L47648
- EMBL:   AL009126
- PIR:   F69932
- RefSeq:   NP_390184.1
- ProteinModelPortal:   P50728
- EnsemblBacteria:   EBBACT00000002361
- GeneID:   938973
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23030
- NMPDR:   fig|224308.1.peg.2307
- GenoList:   BSU23030
- GeneTree:   EBGT00050000000885
- HOGENOM:   HBG475714
- OMA:   ATIEDHF
- ProtClustDB:   CLSK2460931
- BioCyc:   BSUB:BSU23030-MONOMER
- InterPro:   IPR008308
- PIRSF:   PIRSF021350

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40709; Mature: 40578

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNYFDIMVLDCLCKINGERSGSAVFHLFKGKRSSQTIQDAGLFQTAKYFGMAAKCSRS
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
DISASLDKLEKHSYLAPMSESDTYKVTASGAAVLRHALSERPWPVHCHGAHYQQAAGVLW
HHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH
KRLSLLVQVLSHKQQGSRQYIPVTKDHKTLHWVKKYLSRHTDHIEMAKSLFAMLEAHLKK
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IENKAAQIFVYSLTSHHRIGYTSRQLADTLKEDEWYVYIMFWASVHYFIHSLPECEDALL
HHHHHHEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCHHHHHH
KDLLSDVHLDNALTESTRKTWQMVKQGFPIQRIAEIRKLKTATIEDHIVEISLHEPAFMI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCHHHH
NDYVSAEDQLQIAEFAKRMRTNKIKQIRDGLEQRFSYFQIRLALTKQVQQYD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLNYFDIMVLDCLCKINGERSGSAVFHLFKGKRSSQTIQDAGLFQTAKYFGMAAKCSRS
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHH
DISASLDKLEKHSYLAPMSESDTYKVTASGAAVLRHALSERPWPVHCHGAHYQQAAGVLW
HHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH
KRLSLLVQVLSHKQQGSRQYIPVTKDHKTLHWVKKYLSRHTDHIEMAKSLFAMLEAHLKK
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
IENKAAQIFVYSLTSHHRIGYTSRQLADTLKEDEWYVYIMFWASVHYFIHSLPECEDALL
HHHHHHEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCHHHHHH
KDLLSDVHLDNALTESTRKTWQMVKQGFPIQRIAEIRKLKTATIEDHIVEISLHEPAFMI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCHHHH
NDYVSAEDQLQIAEFAKRMRTNKIKQIRDGLEQRFSYFQIRLALTKQVQQYD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377