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The map label for this gene is ypbF

Identifier: 16079356

GI number: 16079356

Start: 2405114

End: 2405557

Strand: Reverse

Name: ypbF

Synonym: BSU22990

Alternate gene names: 16079356

Gene position: 2405557-2405114 (Counterclockwise)

Preceding gene: 16079357

Following gene: 16079355

Centisome position: 57.06

GC content: 39.19

Gene sequence:

>444_bases
ATGGAATCCTTATGGAATCAGCTGGATCAGTTTACAGACGCGCCGACCAAACAGATGCTCCAAGCGCTGGTAAAACGAAA
ACAAAAATTCGAAAATTATGCAGCACAATGCCGCAGATGGCGATGGGCTTCACTTATCTGCCTAGGCTTATTATGTGTTA
TGATCATGATCAAAAGCCCGGAGCCTCAGCTTATACTTCAAGAAATACTTAGCCATACCTTTTATTTATTTTGGATGCTG
GCAACCGCTTTTGCCTACTGCACTTCATATTATTTCAAGAAAAAGGAAGAAAAATCCGAGACTGATTTCCATAAACTGAG
ATGTGAAATTATTCAGAAAAGCACTGATCTCTGGCCGCAGCCCGATAAATGGAAGGCGAGAGAGTCTGTTTTTCATATGA
TGAAGCACAAATATGACATTAATCTATATTTTGAAAGTAAATAA

Upstream 100 bases:

>100_bases
CCGGACAAGTTTTGGACATCCCTTTAATGGATGAATAGGGTATTATTTTTATTTTACGTTCATATATTGTAGCAATGAAA
ATGGACAAGGTGTGAAGCGT

Downstream 100 bases:

>100_bases
AATGGGGCGTTTTCTCAAACGATAGAAACGTCTTTTTTTATTGTCCGTCTTATTGATAAGTTCTAAAAAGAATGGAGAGT
TTTTTATGAAGCTATCAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MESLWNQLDQFTDAPTKQMLQALVKRKQKFENYAAQCRRWRWASLICLGLLCVMIMIKSPEPQLILQEILSHTFYLFWML
ATAFAYCTSYYFKKKEEKSETDFHKLRCEIIQKSTDLWPQPDKWKARESVFHMMKHKYDINLYFESK

Sequences:

>Translated_147_residues
MESLWNQLDQFTDAPTKQMLQALVKRKQKFENYAAQCRRWRWASLICLGLLCVMIMIKSPEPQLILQEILSHTFYLFWML
ATAFAYCTSYYFKKKEEKSETDFHKLRCEIIQKSTDLWPQPDKWKARESVFHMMKHKYDINLYFESK
>Mature_147_residues
MESLWNQLDQFTDAPTKQMLQALVKRKQKFENYAAQCRRWRWASLICLGLLCVMIMIKSPEPQLILQEILSHTFYLFWML
ATAFAYCTSYYFKKKEEKSETDFHKLRCEIIQKSTDLWPQPDKWKARESVFHMMKHKYDINLYFESK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPBF_BACSU (P50732)

Other databases:

- EMBL:   L47648
- EMBL:   AL009126
- PIR:   A69933
- RefSeq:   NP_390180.1
- EnsemblBacteria:   EBBACT00000002342
- GeneID:   938976
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU22990
- NMPDR:   fig|224308.1.peg.2303
- GenoList:   BSU22990
- GeneTree:   EBGT00050000001080
- HOGENOM:   HBG345101
- OMA:   ARESVFH
- ProtClustDB:   CLSK873079
- BioCyc:   BSUB:BSU22990-MONOMER
- InterPro:   IPR020210
- ProDom:   PD089241

Pfam domain/function: PF10864 DUF2663

EC number: NA

Molecular weight: Translated: 17865; Mature: 17865

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10513788)-; HASH(0x10149d34)-;

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLWNQLDQFTDAPTKQMLQALVKRKQKFENYAAQCRRWRWASLICLGLLCVMIMIKSP
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EPQLILQEILSHTFYLFWMLATAFAYCTSYYFKKKEEKSETDFHKLRCEIIQKSTDLWPQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDKWKARESVFHMMKHKYDINLYFESK
CCCHHHHHHHHHHHHHHCCEEEEEECH
>Mature Secondary Structure
MESLWNQLDQFTDAPTKQMLQALVKRKQKFENYAAQCRRWRWASLICLGLLCVMIMIKSP
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EPQLILQEILSHTFYLFWMLATAFAYCTSYYFKKKEEKSETDFHKLRCEIIQKSTDLWPQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDKWKARESVFHMMKHKYDINLYFESK
CCCHHHHHHHHHHHHHHCCEEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377