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The map label for this gene is cotD

Identifier: 16079278

GI number: 16079278

Start: 2332784

End: 2333011

Strand: Reverse

Name: cotD

Synonym: BSU22200

Alternate gene names: 16079278

Gene position: 2333011-2332784 (Counterclockwise)

Preceding gene: 16079279

Following gene: 255767483

Centisome position: 55.34

GC content: 46.93

Gene sequence:

>228_bases
ATGCATCACTGCAGACCGCATATGATGGCGCCAATTGTCCATCCTACTCATTGCTGTGAACACCATACGTTTTCGAAGAC
TATCGTGCCGCACATTCACCCACAGCATACAACAAACGTAAACCACCAGCATTTTCAGCACGTTCACTACTTTCCACACA
CTTTCTCAAATGTTGACCCGGCTACGCATCAGCATTTTCAAGCAGGAAAACCTTGCTGCGACTACTAG

Upstream 100 bases:

>100_bases
TAATTGCACACTTTTAAAATAGGTCTTTGCATCAGAACATGTACCCCTTATTTTTCATAACTTAGTATTGTAATAAAGTT
TATGGAAAGGGGATTTTATC

Downstream 100 bases:

>100_bases
TATGGAAAACGTGCAGCTTGATGGTGTAAACAATGCAGCACAACAAATGGGGCCCACGGGAGCCCCATTTTTTAAAGCAG
GTGAAATGATGAAAGTATTG

Product: spore coat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MHHCRPHMMAPIVHPTHCCEHHTFSKTIVPHIHPQHTTNVNHQHFQHVHYFPHTFSNVDPATHQHFQAGKPCCDY

Sequences:

>Translated_75_residues
MHHCRPHMMAPIVHPTHCCEHHTFSKTIVPHIHPQHTTNVNHQHFQHVHYFPHTFSNVDPATHQHFQAGKPCCDY
>Mature_75_residues
MHHCRPHMMAPIVHPTHCCEHHTFSKTIVPHIHPQHTTNVNHQHFQHVHYFPHTFSNVDPATHQHFQAGKPCCDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): COTD_BACSU (P07791)

Other databases:

- EMBL:   X05681
- EMBL:   L47838
- EMBL:   AL009126
- PIR:   D27393
- RefSeq:   NP_390102.1
- EnsemblBacteria:   EBBACT00000001502
- GeneID:   939051
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU22200
- NMPDR:   fig|224308.1.peg.2225
- GenoList:   BSU22200
- GeneTree:   EBGT00050000002678
- HOGENOM:   HBG313507
- OMA:   HPQHTTN
- ProtClustDB:   CLSK887486
- BioCyc:   BSUB:BSU22200-MONOMER
- InterPro:   IPR020108
- ProDom:   PD057197

Pfam domain/function: PF11122 Spore-coat_CotD

EC number: NA

Molecular weight: Translated: 8840; Mature: 8840

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHCRPHMMAPIVHPTHCCEHHTFSKTIVPHIHPQHTTNVNHQHFQHVHYFPHTFSNVDP
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
ATHQHFQAGKPCCDY
CCCHHHCCCCCCCCC
>Mature Secondary Structure
MHHCRPHMMAPIVHPTHCCEHHTFSKTIVPHIHPQHTTNVNHQHFQHVHYFPHTFSNVDP
CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC
ATHQHFQAGKPCCDY
CCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2821284; 8760912; 9384377; 1691789