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The map label for this gene is yphP

Identifier: 16079245

GI number: 16079245

Start: 2300221

End: 2300655

Strand: Reverse

Name: yphP

Synonym: BSU21860

Alternate gene names: 16079245

Gene position: 2300655-2300221 (Counterclockwise)

Preceding gene: 255767479

Following gene: 255767478

Centisome position: 54.57

GC content: 47.59

Gene sequence:

>435_bases
ATGTCAATGGCTTATGAAGAATACATGCGCCAGCTTGTCGTACCGATGCGCCGCGAGCTGACTGGAGCAGGTTTTGAAGA
GTTAACAACAGCGGAAGAAGTAGAAAACTTTATGGAAAAGGCAGAGGGCACAACTCTTGTAGTCGTTAACTCTGTATGCG
GCTGCGCGGCAGGCCTTGCGCGTCCTGCGGCTACACAGGCAGTCCTCCAGAATGACAAAACACCTGACAATACGGTGACT
GTATTTGCGGGCCAAGATAAAGAAGCTACTGCGAAAATGCGTGAGTATTTTACTGGCCAGGAGCCTTCTTCACCATCAAT
GGCTCTTTTGAAAGGCAAAGAAGTCGTACATTTTATTCCGCGTCATGAAATTGAAGGACACGATATGGAAGAAATCATGA
AAAATCTGACTGCTGCCTTCGATGCGCACTGCTAA

Upstream 100 bases:

>100_bases
GGGGACACTTTCTTTTATTTTAAGGCGTGAACATTTGAAATCCGGCCCTCTCTATAGTATCCTTTACTTCAGATGAAGGA
TACTAGAGGGGGCTTTTTTT

Downstream 100 bases:

>100_bases
ATGCCCGTTCTCCGGGCATTTTCTTTTTGGGAGTACAGAAGATGATAACAACAAGCTATAGACCGTCTGAACACACCATA
AAAACTGCAAAGCAGCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MSMAYEEYMRQLVVPMRRELTGAGFEELTTAEEVENFMEKAEGTTLVVVNSVCGCAAGLARPAATQAVLQNDKTPDNTVT
VFAGQDKEATAKMREYFTGQEPSSPSMALLKGKEVVHFIPRHEIEGHDMEEIMKNLTAAFDAHC

Sequences:

>Translated_144_residues
MSMAYEEYMRQLVVPMRRELTGAGFEELTTAEEVENFMEKAEGTTLVVVNSVCGCAAGLARPAATQAVLQNDKTPDNTVT
VFAGQDKEATAKMREYFTGQEPSSPSMALLKGKEVVHFIPRHEIEGHDMEEIMKNLTAAFDAHC
>Mature_143_residues
SMAYEEYMRQLVVPMRRELTGAGFEELTTAEEVENFMEKAEGTTLVVVNSVCGCAAGLARPAATQAVLQNDKTPDNTVTV
FAGQDKEATAKMREYFTGQEPSSPSMALLKGKEVVHFIPRHEIEGHDMEEIMKNLTAAFDAHC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0403 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPHP_BACSU (P54170)

Other databases:

- EMBL:   L77246
- EMBL:   AL009126
- PIR:   D69936
- RefSeq:   NP_390069.1
- PDB:   3FHK
- PDBsum:   3FHK
- ProteinModelPortal:   P54170
- SMR:   P54170
- EnsemblBacteria:   EBBACT00000002668
- GeneID:   939085
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21860
- NMPDR:   fig|224308.1.peg.2192
- GenoList:   BSU21860
- GeneTree:   EBGT00050000002422
- HOGENOM:   HBG293321
- OMA:   VVHFIPR
- ProtClustDB:   CLSK873109
- BioCyc:   BSUB:BSU21860-MONOMER
- InterPro:   IPR009474

Pfam domain/function: PF06491 DUF1094

EC number: NA

Molecular weight: Translated: 15875; Mature: 15744

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMAYEEYMRQLVVPMRRELTGAGFEELTTAEEVENFMEKAEGTTLVVVNSVCGCAAGLA
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHC
RPAATQAVLQNDKTPDNTVTVFAGQDKEATAKMREYFTGQEPSSPSMALLKGKEVVHFIP
CHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHCC
RHEIEGHDMEEIMKNLTAAFDAHC
CCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SMAYEEYMRQLVVPMRRELTGAGFEELTTAEEVENFMEKAEGTTLVVVNSVCGCAAGLA
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHC
RPAATQAVLQNDKTPDNTVTVFAGQDKEATAKMREYFTGQEPSSPSMALLKGKEVVHFIP
CHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHCC
RHEIEGHDMEEIMKNLTAAFDAHC
CCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377