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The map label for this gene is yonD

Identifier: 16079172

GI number: 16079172

Start: 2234233

End: 2235669

Strand: Direct

Name: yonD

Synonym: BSU21130

Alternate gene names: 16079172

Gene position: 2234233-2235669 (Clockwise)

Preceding gene: 16079171

Following gene: 16079173

Centisome position: 53.0

GC content: 34.73

Gene sequence:

>1437_bases
TTGACAAAGAAGCAAAAGAAAAAACTATGCCAACTTCAATTGAATGAGATTAAAACATCAGATGACCCAACAAAGTTGTC
ATGTAGCTTTGTCATTTTTGATTTCGATGTCTCTCACAATAATACAGTAATTTCTAAGGATGTTGCTCTTGAAGCTGCTT
CAACAATTATTAATAAACCGATTGTTGCAAAATATTACGAGGTTGATGAATTAAATACTTCTACAGATGCATTGGGAACT
CATGAAGCTTATCTAGACACAGATAAGCACGGAGAACTTGAAGTAAAAAGAGATACTGCCCCAATCGGTGTCTTTACATC
CGAGGGATACATAACTGAAATTGAAACCCCAGATGGCAAAAAAGAAGTATTGGCAGCAGATGCAATACTTTGGAGCTCTC
GATTTAAAGATGCATGTGAACTTTTACTTGAATGGTATGGTAGAGGCATCAACATTAATACAAGTTGTGAGATCCTTTAT
TCAAATTACACTGTGCAAGATGGTATCGAACACCTACAGTCCCCCATCTATTTCGAAGGTCATGCAATTTTAAATTCAGA
GAAACGTGGAGAGCATGACATTGTCCTCCCCGCCTATGATTCTTCCAAACTTCTAAGCTTTAATGAACTTCAACGATTTG
AAAGATTAGTGGCTCAAGCAGCTACAAGACAAAATAATGAGGAAGGTGAAAAAATGAATAAGTTTAGAAAAGTGTTTGAA
TTGTCTCACTCTGACGTTCGGACGCTTCTATATAGCCAATTAGATCCAACCCTTGATAAAGAATCAGATTCATTTATTGC
AGATGTATATGATACGTATTTCATCGTAAACGTGTATAGCTGGTCAGATGAAAATAGCTATGACAAATACTTTAAGTTCA
ATTACACAAGAACAGGCGATACTGTTTCAATTGATTTTGACAGTAAAACTGAGGTATTCATGACGCGCAACTGGGAGGAA
GTTGTTCCTGAGCCTATTCAATCACAACTTAACCAGAAAGATGAACAAATTAAAGATTTAACGAAACAAGTAAATCAAAT
CAATAAGGATAAGGTAGGAATTGAACAGCAATTCAACACTGCCAGTGAAAAGCTTGTGCAATTAAATTCTGAAGTGGAAC
AATTGAAGCCTTATAAAGAAAAACACGAGAAAACTTTATTAGAGCAAAAACTAAGTGAGAAAAATGAATTCTATAAAGCG
AAATTTGAAGCTTTAAATGCTGAGGAAAAATTCAGTACAGAAGAAGTACAAAACCTTATCCATGCTTCGGTTAAACAAGA
TGAAGAAGGAGAAAAAGCTGTATTACAACTTAACACAATGTTAGTTGATTTAGTTAGTGTTCCTACTGAAACAAATACAA
CCATTAGAGAATTTTCAAGTAAACGGGAAAATTTAATCCCTAACGATGACTCTTTTGAATCACGCTTTTCACAATAA

Upstream 100 bases:

>100_bases
TGAAGGTAATAAAAACAACGACAACACAGTGAAGTCAGCTACATCCAACGGTAATGACAATCCTATTTAAAACTTCACTT
TTGAAGGGAGGTGAAATTAT

Downstream 100 bases:

>100_bases
ATTTTAAACTTGGAGGAATAAAATATGGCTACAAGATTACAAAAAGCCCTTACTGAAGTAGGTAATCATACTACTGGAAA
CTTGAATTCTTTAAAAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MTKKQKKKLCQLQLNEIKTSDDPTKLSCSFVIFDFDVSHNNTVISKDVALEAASTIINKPIVAKYYEVDELNTSTDALGT
HEAYLDTDKHGELEVKRDTAPIGVFTSEGYITEIETPDGKKEVLAADAILWSSRFKDACELLLEWYGRGININTSCEILY
SNYTVQDGIEHLQSPIYFEGHAILNSEKRGEHDIVLPAYDSSKLLSFNELQRFERLVAQAATRQNNEEGEKMNKFRKVFE
LSHSDVRTLLYSQLDPTLDKESDSFIADVYDTYFIVNVYSWSDENSYDKYFKFNYTRTGDTVSIDFDSKTEVFMTRNWEE
VVPEPIQSQLNQKDEQIKDLTKQVNQINKDKVGIEQQFNTASEKLVQLNSEVEQLKPYKEKHEKTLLEQKLSEKNEFYKA
KFEALNAEEKFSTEEVQNLIHASVKQDEEGEKAVLQLNTMLVDLVSVPTETNTTIREFSSKRENLIPNDDSFESRFSQ

Sequences:

>Translated_478_residues
MTKKQKKKLCQLQLNEIKTSDDPTKLSCSFVIFDFDVSHNNTVISKDVALEAASTIINKPIVAKYYEVDELNTSTDALGT
HEAYLDTDKHGELEVKRDTAPIGVFTSEGYITEIETPDGKKEVLAADAILWSSRFKDACELLLEWYGRGININTSCEILY
SNYTVQDGIEHLQSPIYFEGHAILNSEKRGEHDIVLPAYDSSKLLSFNELQRFERLVAQAATRQNNEEGEKMNKFRKVFE
LSHSDVRTLLYSQLDPTLDKESDSFIADVYDTYFIVNVYSWSDENSYDKYFKFNYTRTGDTVSIDFDSKTEVFMTRNWEE
VVPEPIQSQLNQKDEQIKDLTKQVNQINKDKVGIEQQFNTASEKLVQLNSEVEQLKPYKEKHEKTLLEQKLSEKNEFYKA
KFEALNAEEKFSTEEVQNLIHASVKQDEEGEKAVLQLNTMLVDLVSVPTETNTTIREFSSKRENLIPNDDSFESRFSQ
>Mature_477_residues
TKKQKKKLCQLQLNEIKTSDDPTKLSCSFVIFDFDVSHNNTVISKDVALEAASTIINKPIVAKYYEVDELNTSTDALGTH
EAYLDTDKHGELEVKRDTAPIGVFTSEGYITEIETPDGKKEVLAADAILWSSRFKDACELLLEWYGRGININTSCEILYS
NYTVQDGIEHLQSPIYFEGHAILNSEKRGEHDIVLPAYDSSKLLSFNELQRFERLVAQAATRQNNEEGEKMNKFRKVFEL
SHSDVRTLLYSQLDPTLDKESDSFIADVYDTYFIVNVYSWSDENSYDKYFKFNYTRTGDTVSIDFDSKTEVFMTRNWEEV
VPEPIQSQLNQKDEQIKDLTKQVNQINKDKVGIEQQFNTASEKLVQLNSEVEQLKPYKEKHEKTLLEQKLSEKNEFYKAK
FEALNAEEKFSTEEVQNLIHASVKQDEEGEKAVLQLNTMLVDLVSVPTETNTTIREFSSKRENLIPNDDSFESRFSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOND_BACSU (O31954)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389996.1
- ProteinModelPortal:   O31954
- EnsemblBacteria:   EBBACT00000002672
- GeneID:   939159
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21130
- NMPDR:   fig|224308.1.peg.2119
- GenoList:   BSU21130
- ProtClustDB:   CLSK254616
- BioCyc:   BSUB:BSU21130-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55051; Mature: 54920

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKQKKKLCQLQLNEIKTSDDPTKLSCSFVIFDFDVSHNNTVISKDVALEAASTIINKP
CCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCEEEEHHHHHHHHHHHHCCC
IVAKYYEVDELNTSTDALGTHEAYLDTDKHGELEVKRDTAPIGVFTSEGYITEIETPDGK
HHEEEEECCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCEEEEECCCEEEEECCCCCH
KEVLAADAILWSSRFKDACELLLEWYGRGININTSCEILYSNYTVQDGIEHLQSPIYFEG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEC
HAILNSEKRGEHDIVLPAYDSSKLLSFNELQRFERLVAQAATRQNNEEGEKMNKFRKVFE
EEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LSHSDVRTLLYSQLDPTLDKESDSFIADVYDTYFIVNVYSWSDENSYDKYFKFNYTRTGD
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCEEEEEEEECCCCCCCCCEEEEEEEECCC
TVSIDFDSKTEVFMTRNWEEVVPEPIQSQLNQKDEQIKDLTKQVNQINKDKVGIEQQFNT
EEEEECCCCCCEEEECCHHHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ASEKLVQLNSEVEQLKPYKEKHEKTLLEQKLSEKNEFYKAKFEALNAEEKFSTEEVQNLI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHH
HASVKQDEEGEKAVLQLNTMLVDLVSVPTETNTTIREFSSKRENLIPNDDSFESRFSQ
HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCC
>Mature Secondary Structure 
TKKQKKKLCQLQLNEIKTSDDPTKLSCSFVIFDFDVSHNNTVISKDVALEAASTIINKP
CCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCEEEEHHHHHHHHHHHHCCC
IVAKYYEVDELNTSTDALGTHEAYLDTDKHGELEVKRDTAPIGVFTSEGYITEIETPDGK
HHEEEEECCCCCCCCCCCCCCHHHCCCCCCCCEEEECCCCCEEEEECCCEEEEECCCCCH
KEVLAADAILWSSRFKDACELLLEWYGRGININTSCEILYSNYTVQDGIEHLQSPIYFEG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEC
HAILNSEKRGEHDIVLPAYDSSKLLSFNELQRFERLVAQAATRQNNEEGEKMNKFRKVFE
EEEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LSHSDVRTLLYSQLDPTLDKESDSFIADVYDTYFIVNVYSWSDENSYDKYFKFNYTRTGD
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCEEEEEEEECCCCCCCCCEEEEEEEECCC
TVSIDFDSKTEVFMTRNWEEVVPEPIQSQLNQKDEQIKDLTKQVNQINKDKVGIEQQFNT
EEEEECCCCCCEEEECCHHHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ASEKLVQLNSEVEQLKPYKEKHEKTLLEQKLSEKNEFYKAKFEALNAEEKFSTEEVQNLI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHH
HASVKQDEEGEKAVLQLNTMLVDLVSVPTETNTTIREFSSKRENLIPNDDSFESRFSQ
HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377