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The map label for this gene is yopB

Identifier: 16079154

GI number: 16079154

Start: 2214972

End: 2215199

Strand: Reverse

Name: yopB

Synonym: BSU20950

Alternate gene names: 16079154

Gene position: 2215199-2214972 (Counterclockwise)

Preceding gene: 16079155

Following gene: 16079153

Centisome position: 52.55

GC content: 36.4

Gene sequence:

>228_bases
ATGATTAGATCAAATTTAAAGTCCATAATAGACGAAAGAAAGATCAGTATCCGGAAGCTATCTAGAGATATTGATCATGA
GTATCCAACTGTCAGAAAGCTTTATAATGACGAAATGGAGCGGTATCCAAGAGATCTGTTAGATAAAGTCTGTACATACC
TAAACATCGAGCTGCAGGAATTGCTGATATTCGAAAAAAGCCATAACCATATCGATCACTCAGGATGA

Upstream 100 bases:

>100_bases
TAGATTTATGCATTATTGACCAAGTCTTATCTTGGTCTTTTTTATGTATCAGTTGATTACTATAAGGTATCAATAAAAGA
CAAATGAAAAGAGTGGAATT

Downstream 100 bases:

>100_bases
AAATGGTATACTAAAGTTACAAGCATAGGAAGGAATTACAAGTTTTCCAGGTCTACATAAAATCGTACTTATATGGAAAA
GGTGAAAAATTAATAAGGAG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MIRSNLKSIIDERKISIRKLSRDIDHEYPTVRKLYNDEMERYPRDLLDKVCTYLNIELQELLIFEKSHNHIDHSG

Sequences:

>Translated_75_residues
MIRSNLKSIIDERKISIRKLSRDIDHEYPTVRKLYNDEMERYPRDLLDKVCTYLNIELQELLIFEKSHNHIDHSG
>Mature_75_residues
MIRSNLKSIIDERKISIRKLSRDIDHEYPTVRKLYNDEMERYPRDLLDKVCTYLNIELQELLIFEKSHNHIDHSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOPB_BACSU (O31936)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389978.1
- ProteinModelPortal:   O31936
- SMR:   O31936
- EnsemblBacteria:   EBBACT00000003762
- GeneID:   939178
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20950
- NMPDR:   fig|224308.1.peg.2101
- GenoList:   BSU20950
- BioCyc:   BSUB:BSU20950-MONOMER
- InterPro:   IPR010982

Pfam domain/function: SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 9100; Mature: 9100

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSNLKSIIDERKISIRKLSRDIDHEYPTVRKLYNDEMERYPRDLLDKVCTYLNIELQE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIFEKSHNHIDHSG
HHHHHHCCCCCCCCC
>Mature Secondary Structure
MIRSNLKSIIDERKISIRKLSRDIDHEYPTVRKLYNDEMERYPRDLLDKVCTYLNIELQE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIFEKSHNHIDHSG
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377