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The map label for this gene is yopU

Identifier: 16079135

GI number: 16079135

Start: 2203111

End: 2203308

Strand: Reverse

Name: yopU

Synonym: BSU20760

Alternate gene names: 16079135

Gene position: 2203308-2203111 (Counterclockwise)

Preceding gene: 16079136

Following gene: 16079134

Centisome position: 52.27

GC content: 30.3

Gene sequence:

>198_bases
TTGAATATATTTGTTGATCAAGATAATTACAAAGAGGTTAGTCTGAAACTTACAAAAAAATTGCTGACTTCAGAACATTA
TCAATTCCTACTTTGTTTCAAGGGAGAGAAATTAGATATTACAATTTCAGTTACACCACAAAGCCTCGTTAAGCTTAGGG
ATGACATCAATGAATTGATCTTTATGTTCTCAGATTAA

Upstream 100 bases:

>100_bases
AATAACAAATACAGAAGAATTGCCTGAGTAAAAATAAAAAAAAGAAAGACTCCATTAAACATAATGTAATCAGCAGCAAG
AGGAGAATGAAGGTATTGTT

Downstream 100 bases:

>100_bases
AATTAGATTCGGTCACATAAATTGGCCGAATCTAATTGACAGATATTAAATGATGGGTTATAGTTTATTCAAATACAAAT
AATATGTATATAGGAGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MNIFVDQDNYKEVSLKLTKKLLTSEHYQFLLCFKGEKLDITISVTPQSLVKLRDDINELIFMFSD

Sequences:

>Translated_65_residues
MNIFVDQDNYKEVSLKLTKKLLTSEHYQFLLCFKGEKLDITISVTPQSLVKLRDDINELIFMFSD
>Mature_65_residues
MNIFVDQDNYKEVSLKLTKKLLTSEHYQFLLCFKGEKLDITISVTPQSLVKLRDDINELIFMFSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOPU_BACSU (O34937)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389958.1
- EnsemblBacteria:   EBBACT00000001377
- GeneID:   936485
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20760
- NMPDR:   fig|224308.1.peg.2081
- GenoList:   BSU20760
- BioCyc:   BSUB:BSU20760-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7658; Mature: 7658

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIFVDQDNYKEVSLKLTKKLLTSEHYQFLLCFKGEKLDITISVTPQSLVKLRDDINELI
CEEEECCCCCEEHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECHHHHHHHHHCHHHEE
FMFSD
EEECC
>Mature Secondary Structure
MNIFVDQDNYKEVSLKLTKKLLTSEHYQFLLCFKGEKLDITISVTPQSLVKLRDDINELI
CEEEECCCCCEEHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECHHHHHHHHHCHHHEE
FMFSD
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377