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The map label for this gene is yoqJ

Identifier: 16079120

GI number: 16079120

Start: 2197344

End: 2197859

Strand: Reverse

Name: yoqJ

Synonym: BSU20610

Alternate gene names: 16079120

Gene position: 2197859-2197344 (Counterclockwise)

Preceding gene: 16079121

Following gene: 16079119

Centisome position: 52.14

GC content: 34.5

Gene sequence:

>516_bases
ATGAAAAATCCAACAATGCTTAAACTCAAAGATAAGCTGCTTGCAGTAATTGAAGAATTAATCACTAAGGAAAACAAGTA
TAGGTTTATAACTGGAGGAGCGTTAGGAACTGATCAGGCTGCTTGTTGGTGTGTGCATATTCTAAAGAAGAAACACCCTC
ATATCAAAAACATAATTGCCACACCTTTCAAAGAACAAGATAAAGTTTGGTCTGCAGACCAAAAAATGTGGTACAAACGT
ATGCTTAATGTAGCAGATGAGATTATTAATGTTGAAGAATTAGATAAATATAAAGTTAGTGGAGAGAAACCAGGAGAGTT
TTCGCCAGCTAAGATGCAAAAGCGAAATGAATACATGATTGATCACAGTGAGGCAATAGTAGCTGTTTATGATGGAAGTA
AAAGTGGTACAAGAAACTGCTTAAATTACGCCAAGAAAACTTACTTAGGACATCAGCTATGGAGACTTCATCCTGATTTT
AATTTTGAATTAGATATTACGTATTTTGTTGGATGA

Upstream 100 bases:

>100_bases
GAGAAATGAACGTGAGCGGATATATCAAGAAAAGGAGTCTATAAGAAAGAAAACTGTGTGCTTCACTGGTCATAGGCCGA
ACAAATTGGGTGGATACGAT

Downstream 100 bases:

>100_bases
TAAGGAGAGGTGAACTTTTCTGAAACTAATAGAAGAAAGAACATATGAAGAACGATTGTACATATATTCTGATGATATTG
AAGCCAGAAAGCATTTCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKNPTMLKLKDKLLAVIEELITKENKYRFITGGALGTDQAACWCVHILKKKHPHIKNIIATPFKEQDKVWSADQKMWYKR
MLNVADEIINVEELDKYKVSGEKPGEFSPAKMQKRNEYMIDHSEAIVAVYDGSKSGTRNCLNYAKKTYLGHQLWRLHPDF
NFELDITYFVG

Sequences:

>Translated_171_residues
MKNPTMLKLKDKLLAVIEELITKENKYRFITGGALGTDQAACWCVHILKKKHPHIKNIIATPFKEQDKVWSADQKMWYKR
MLNVADEIINVEELDKYKVSGEKPGEFSPAKMQKRNEYMIDHSEAIVAVYDGSKSGTRNCLNYAKKTYLGHQLWRLHPDF
NFELDITYFVG
>Mature_171_residues
MKNPTMLKLKDKLLAVIEELITKENKYRFITGGALGTDQAACWCVHILKKKHPHIKNIIATPFKEQDKVWSADQKMWYKR
MLNVADEIINVEELDKYKVSGEKPGEFSPAKMQKRNEYMIDHSEAIVAVYDGSKSGTRNCLNYAKKTYLGHQLWRLHPDF
NFELDITYFVG

Specific function: Unknown

COG id: COG4474

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOQJ_BACSU (O34359)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389943.1
- ProteinModelPortal:   O34359
- SMR:   O34359
- EnsemblBacteria:   EBBACT00000002049
- GeneID:   939585
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20610
- NMPDR:   fig|224308.1.peg.2066
- GenoList:   BSU20610
- GeneTree:   EBGT00050000001030
- OMA:   DIDRERY
- ProtClustDB:   CLSK2301464
- BioCyc:   BSUB:BSU20610-MONOMER
- InterPro:   IPR010697
- PIRSF:   PIRSF021290

Pfam domain/function: PF06908 DUF1273

EC number: NA

Molecular weight: Translated: 19883; Mature: 19883

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNPTMLKLKDKLLAVIEELITKENKYRFITGGALGTDQAACWCVHILKKKHPHIKNIIA
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHC
TPFKEQDKVWSADQKMWYKRMLNVADEIINVEELDKYKVSGEKPGEFSPAKMQKRNEYMI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEECCCCCCCCCCHHHHHHCCCEEE
DHSEAIVAVYDGSKSGTRNCLNYAKKTYLGHQLWRLHPDFNFELDITYFVG
ECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEEEC
>Mature Secondary Structure
MKNPTMLKLKDKLLAVIEELITKENKYRFITGGALGTDQAACWCVHILKKKHPHIKNIIA
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHC
TPFKEQDKVWSADQKMWYKRMLNVADEIINVEELDKYKVSGEKPGEFSPAKMQKRNEYMI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEECCCCCCCCCCHHHHHHCCCEEE
DHSEAIVAVYDGSKSGTRNCLNYAKKTYLGHQLWRLHPDFNFELDITYFVG
ECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377