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The map label for this gene is yoqO

Identifier: 16079115

GI number: 16079115

Start: 2195173

End: 2195547

Strand: Direct

Name: yoqO

Synonym: BSU20560

Alternate gene names: 16079115

Gene position: 2195173-2195547 (Clockwise)

Preceding gene: 16079111

Following gene: 16079117

Centisome position: 52.07

GC content: 33.6

Gene sequence:

>375_bases
TTGAGTAAAACAATCGGTATTACTGGATTTTTCTTAAGCATAGTAGTGCAATCATTTTCGGCGAATGATTCGCTATCCCA
CAAGATCGCTACGGGTTTATTATTTGTATCAATAGCAATTTATAATTTTGACCACGCTAAAGATTATTCCAAAGCATCCC
TTGTCGTAATATGCCTCACCTTTTTCGTACTTGCCTTGGGTATTCATAAGCTTCTTTCCTTTTCGAGTGACTTATTTGAC
AATGTGAATATAAATTTCGGAGTAATATTCATCCTCCAAATCACATTAATAATTGGATCTGTTGCAATAGCTATCAGTAT
AATGAAATTTATCTGTGATCGTCTAAAAAAGAAACCTAACGGTAAAGAGTGTTAA

Upstream 100 bases:

>100_bases
TTAAATCACGATTTTAATTTAACTTTAATGTGTATCATCTTGAGAAAATCCCCTTTAATTGGTAAACTCATACTTAACTT
ACATAAGAGTAGGTGATTCC

Downstream 100 bases:

>100_bases
TTCCTCTTTGCCTTTTTTATGCTAAATACTTCTTCTTATGTGGTCTTCTATGTACAAAATCAAATGCTATATCAACTTTT
GCATTTTCCTTCTCCTCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSKTIGITGFFLSIVVQSFSANDSLSHKIATGLLFVSIAIYNFDHAKDYSKASLVVICLTFFVLALGIHKLLSFSSDLFD
NVNINFGVIFILQITLIIGSVAIAISIMKFICDRLKKKPNGKEC

Sequences:

>Translated_124_residues
MSKTIGITGFFLSIVVQSFSANDSLSHKIATGLLFVSIAIYNFDHAKDYSKASLVVICLTFFVLALGIHKLLSFSSDLFD
NVNINFGVIFILQITLIIGSVAIAISIMKFICDRLKKKPNGKEC
>Mature_123_residues
SKTIGITGFFLSIVVQSFSANDSLSHKIATGLLFVSIAIYNFDHAKDYSKASLVVICLTFFVLALGIHKLLSFSSDLFDN
VNINFGVIFILQITLIIGSVAIAISIMKFICDRLKKKPNGKEC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOQO_BACSU (O31923)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389938.1
- ProteinModelPortal:   O31923
- EnsemblBacteria:   EBBACT00000000979
- GeneID:   936492
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20560
- NMPDR:   fig|224308.1.peg.2061
- GenoList:   BSU20560
- GeneTree:   EBGT00050000000856
- HOGENOM:   HBG338101
- OMA:   THKIAMA
- ProtClustDB:   CLSK887446
- BioCyc:   BSUB:BSU20560-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13595; Mature: 13464

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xfabfc38)-; HASH(0xfcf6c20)-;

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTIGITGFFLSIVVQSFSANDSLSHKIATGLLFVSIAIYNFDHAKDYSKASLVVICLT
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHH
FFVLALGIHKLLSFSSDLFDNVNINFGVIFILQITLIIGSVAIAISIMKFICDRLKKKPN
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GKEC
CCCH
>Mature Secondary Structure 
SKTIGITGFFLSIVVQSFSANDSLSHKIATGLLFVSIAIYNFDHAKDYSKASLVVICLT
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHH
FFVLALGIHKLLSFSSDLFDNVNINFGVIFILQITLIIGSVAIAISIMKFICDRLKKKPN
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GKEC
CCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377