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The map label for this gene is yoqW

Identifier: 16079108

GI number: 16079108

Start: 2191626

End: 2192300

Strand: Direct

Name: yoqW

Synonym: BSU20490

Alternate gene names: 16079108

Gene position: 2191626-2192300 (Clockwise)

Preceding gene: 16079078

Following gene: 16079109

Centisome position: 51.99

GC content: 40.59

Gene sequence:

>675_bases
ATGTGTGGCAGGTTCACTTTATTTTCTGAGTTTGATGACATCATTGAGCAATTCAATATAGATCAATTCTTACCTGAAGG
TGAATATCACCCTAGCTATAATGTCGCTCCTTCACAAAACATCCTGACAATCATCAACGATGGATCCAATAACCGTCTGG
GCAAACTTAGATGGGGTCTTATCCCTCCATGGGCTAAAGACGAAAAGATCGGCTATAAAATGATTAATGCCCGTGCTGAA
ACATTGTCCGAGAAACCCAGCTTTCGAAAGCCGCTCGTAAGCAAACGTTGTATCATACCGGCTGACAGTTTTTATGAATG
GAAACGCCTTGATCCAAAGACTAAGATTCCTATGCGGATTAAACTTAAATCGTCCAATCTCTTCGCTTTTGCAGGCTTAT
ACGAAAAGTGGAACACACCAGAAGGCAATCCTTTATACACTTGCACAATCATTACAACAAAGCCTAATGAGCTTATGGAA
GACATCCATGATCGGATGCCGGTTATCCTTACTGATGAGAACGAAAAGGAATGGCTCAACCCTAAAAATACTGATCCTGA
TTATCTACAAAGCTTACTGCAGCCATATGATGCTGATGACATGGAAGCATACCAGGTTTCATCTTTAGTGAATTCACCTA
AAAACAATTCACCTGAGCTCATTGAATCCCATTAA

Upstream 100 bases:

>100_bases
TTCTTTAACCTCAACTGTTTGCTGCGGCATCACATTCCTCCTTTTTGATTTTCGTGTATCAAGCCTGTACAATATTCAAA
AACCCTAAAGGATGATGAAC

Downstream 100 bases:

>100_bases
GTACCACTGCCATATCGCTTTATATATCACCTTCGCTTAGCTAATATGTTCTAAGTAGGAGGTGATATTTTGTTTGTATC
GCCAATGCTATTGCATTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MCGRFTLFSEFDDIIEQFNIDQFLPEGEYHPSYNVAPSQNILTIINDGSNNRLGKLRWGLIPPWAKDEKIGYKMINARAE
TLSEKPSFRKPLVSKRCIIPADSFYEWKRLDPKTKIPMRIKLKSSNLFAFAGLYEKWNTPEGNPLYTCTIITTKPNELME
DIHDRMPVILTDENEKEWLNPKNTDPDYLQSLLQPYDADDMEAYQVSSLVNSPKNNSPELIESH

Sequences:

>Translated_224_residues
MCGRFTLFSEFDDIIEQFNIDQFLPEGEYHPSYNVAPSQNILTIINDGSNNRLGKLRWGLIPPWAKDEKIGYKMINARAE
TLSEKPSFRKPLVSKRCIIPADSFYEWKRLDPKTKIPMRIKLKSSNLFAFAGLYEKWNTPEGNPLYTCTIITTKPNELME
DIHDRMPVILTDENEKEWLNPKNTDPDYLQSLLQPYDADDMEAYQVSSLVNSPKNNSPELIESH
>Mature_224_residues
MCGRFTLFSEFDDIIEQFNIDQFLPEGEYHPSYNVAPSQNILTIINDGSNNRLGKLRWGLIPPWAKDEKIGYKMINARAE
TLSEKPSFRKPLVSKRCIIPADSFYEWKRLDPKTKIPMRIKLKSSNLFAFAGLYEKWNTPEGNPLYTCTIITTKPNELME
DIHDRMPVILTDENEKEWLNPKNTDPDYLQSLLQPYDADDMEAYQVSSLVNSPKNNSPELIESH

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family

Homologues:

Organism=Homo sapiens, GI54607106, Length=269, Percent_Identity=29.368029739777, Blast_Score=113, Evalue=1e-25,
Organism=Homo sapiens, GI54607104, Length=269, Percent_Identity=29.368029739777, Blast_Score=113, Evalue=1e-25,
Organism=Escherichia coli, GI48994894, Length=233, Percent_Identity=27.4678111587983, Blast_Score=75, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6323761, Length=201, Percent_Identity=31.8407960199005, Blast_Score=94, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21355761, Length=254, Percent_Identity=27.1653543307087, Blast_Score=91, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOQW_BACSU (O31916)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389931.1
- ProteinModelPortal:   O31916
- SMR:   O31916
- EnsemblBacteria:   EBBACT00000001095
- GeneID:   939979
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20490
- NMPDR:   fig|224308.1.peg.2054
- GenoList:   BSU20490
- GeneTree:   EBGT00050000006080
- HOGENOM:   HBG690672
- OMA:   FAGLWEK
- PhylomeDB:   O31916
- ProtClustDB:   CLSK237932
- BioCyc:   BSUB:BSU20490-MONOMER
- InterPro:   IPR003738
- PANTHER:   PTHR13604

Pfam domain/function: PF02586 DUF159

EC number: NA

Molecular weight: Translated: 25950; Mature: 25950

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFTLFSEFDDIIEQFNIDQFLPEGEYHPSYNVAPSQNILTIINDGSNNRLGKLRWGL
CCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECC
IPPWAKDEKIGYKMINARAETLSEKPSFRKPLVSKRCIIPADSFYEWKRLDPKTKIPMRI
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCHHHCEEECCCCCCHHHHHCCCCCCCCEEE
KLKSSNLFAFAGLYEKWNTPEGNPLYTCTIITTKPNELMEDIHDRMPVILTDENEKEWLN
EEECCCEEEEEEHHHHCCCCCCCEEEEEEEEEECHHHHHHHHHHCCCEEEECCCCHHHCC
PKNTDPDYLQSLLQPYDADDMEAYQVSSLVNSPKNNSPELIESH
CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MCGRFTLFSEFDDIIEQFNIDQFLPEGEYHPSYNVAPSQNILTIINDGSNNRLGKLRWGL
CCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECC
IPPWAKDEKIGYKMINARAETLSEKPSFRKPLVSKRCIIPADSFYEWKRLDPKTKIPMRI
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCHHHCEEECCCCCCHHHHHCCCCCCCCEEE
KLKSSNLFAFAGLYEKWNTPEGNPLYTCTIITTKPNELMEDIHDRMPVILTDENEKEWLN
EEECCCEEEEEEHHHHCCCCCCCEEEEEEEEEECHHHHHHHHHHCCCEEEECCCCHHHCC
PKNTDPDYLQSLLQPYDADDMEAYQVSSLVNSPKNNSPELIESH
CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377