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The map label for this gene is yorI

Identifier: 16079096

GI number: 16079096

Start: 2182408

End: 2183922

Strand: Reverse

Name: yorI

Synonym: BSU20370

Alternate gene names: 16079096

Gene position: 2183922-2182408 (Counterclockwise)

Preceding gene: 16079097

Following gene: 16079095

Centisome position: 51.81

GC content: 33.86

Gene sequence:

>1515_bases
TTGCTACAAGACAAACAGGCAATAATTCAAGTTTTAGGGAGCATTTTAAAAGATCCCACAATCTTGTCAGAGAGCAATAA
ATATAAGATAACTTCGGATGATTTTCCTTCAAGGTTTCATTCAATATTATTTTTTGCCATGAGCAACCTATTTCATCAAG
GAACTGAAGTATTGAATGACGTTGAAATAGATGGATATCTAAAGGATTACGATATTCAATATAAAATTTTCCATGATAAT
AAGGGTCTTGAATATATAGAAAAAATACAAGAGTTGGCAGTTGTCGAAAACTTTGATTACCACTATAAAAGATTAAAAAA
GTTTAGTCTGCTTAGAGAAATGGATGGCTTGGGATTCGATATTAAGGAAATATATGATGAATCTCTGATTGACCCAAAAG
AACAAGAAAAGATGCAAGAACAGTTTGATAAGAAGTCGATTGATGAAATTTTGACAGCTTATGAAATGAAGATTGTAGAC
ATAAAAGAAAAATTCAGAACTTCATCTGAAAGTGTGGGAATCCAGGGTGGAGAAGGTATTAATGAATTATTGGATTCATT
CGAAGAGTCGCCGGATATTGGAGTTCCATTAAATAGCGAAATGCTTACTTCAATTTTTCGGGGATCACGGAAGAAAAAGT
TCTATCTGCGCTCAAGTATTACAGGTGGCGGTAAAACAAGAAACATGGTCGCTGACGCTTGTCGCTTAAGTGCAACTGAA
CTTTATGATCCTAAAAAGAAGGAATGGGTATCAAACCCATGGAGTGAAAGTTCTACAGTTATTTCAACAGAAATGATGGC
CGAAGAATTGCAAAGTTTAGCACTTGCCTACATTAGTAGTGTAGAAGAGAAAAAAATCCTTAGAAACACAATCAATGAAA
AAGAAAAACAACTTGTTCGTAAGGCTGCTAAGGTTCTTCAAGAGTCTAACATATGGTTCGAACATCTGCCTGATTTTAAT
ATTCAGGAGATTGAAAGAACAATTGAAAAGAACGTCATTAAAAACAATGTAGAGTACGTTTATTTCGATTATATTCACTC
ATCAGTAACCATTTTTTCAGAGATGAGCAAAAAAAGCGGTGTCAACTTGAGGGAAGACCAAATTCTTTTACTTATGTCAG
ATAAGTTAAAAGGCTTATGTAACAAATACGATGTCTATATGATGAGTGCAACTCAGCTAAATGGTGATTGGAAAGAAGCA
TGGTTAAAAGGACAAGTAATAGATGCTTCTTACTTGAGAGGAAGTAAGGCCATCGCAGATAAAACAGATGCTGCAATGAT
AATTCTTCCTTTAAGTAAAAAAGAGAAGGATGCAATTGATCCAATTTTAAAAGAAGGATTTTATCCAGAGCCAAATTTTG
TTACACATGTATTTAAAAATAGGGGAAATGAGTATGACAAAGTTAAAGTCTTCTCCCATATCAATATGGGCAACATGCGG
ATAAAGGACTGTTTCACAACAAATCTTGACAATGAACTAATCACAGTTGAGAAATTGAATATAAAAGCAGGATGA

Upstream 100 bases:

>100_bases
AGAATCATAAAAGAGAAGAAATTACTTTGGTCATAAAAAAAGGAATGAGAAAGAAAAGAGGGCTAGTTGATATCTCAATG
CTATAGGAAGGAGAGTCCAT

Downstream 100 bases:

>100_bases
GGGGTGTAGCGCCCTTTGAAGTATGATAAAGACAGAGTAAAAGAAAGCCTAACCATTGAGGATATACATAAGATTTTAAA
AGATTTAGGTAGCGAGAACA

Product: replicative DNA helicase; phage SPbeta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MLQDKQAIIQVLGSILKDPTILSESNKYKITSDDFPSRFHSILFFAMSNLFHQGTEVLNDVEIDGYLKDYDIQYKIFHDN
KGLEYIEKIQELAVVENFDYHYKRLKKFSLLREMDGLGFDIKEIYDESLIDPKEQEKMQEQFDKKSIDEILTAYEMKIVD
IKEKFRTSSESVGIQGGEGINELLDSFEESPDIGVPLNSEMLTSIFRGSRKKKFYLRSSITGGGKTRNMVADACRLSATE
LYDPKKKEWVSNPWSESSTVISTEMMAEELQSLALAYISSVEEKKILRNTINEKEKQLVRKAAKVLQESNIWFEHLPDFN
IQEIERTIEKNVIKNNVEYVYFDYIHSSVTIFSEMSKKSGVNLREDQILLLMSDKLKGLCNKYDVYMMSATQLNGDWKEA
WLKGQVIDASYLRGSKAIADKTDAAMIILPLSKKEKDAIDPILKEGFYPEPNFVTHVFKNRGNEYDKVKVFSHINMGNMR
IKDCFTTNLDNELITVEKLNIKAG

Sequences:

>Translated_504_residues
MLQDKQAIIQVLGSILKDPTILSESNKYKITSDDFPSRFHSILFFAMSNLFHQGTEVLNDVEIDGYLKDYDIQYKIFHDN
KGLEYIEKIQELAVVENFDYHYKRLKKFSLLREMDGLGFDIKEIYDESLIDPKEQEKMQEQFDKKSIDEILTAYEMKIVD
IKEKFRTSSESVGIQGGEGINELLDSFEESPDIGVPLNSEMLTSIFRGSRKKKFYLRSSITGGGKTRNMVADACRLSATE
LYDPKKKEWVSNPWSESSTVISTEMMAEELQSLALAYISSVEEKKILRNTINEKEKQLVRKAAKVLQESNIWFEHLPDFN
IQEIERTIEKNVIKNNVEYVYFDYIHSSVTIFSEMSKKSGVNLREDQILLLMSDKLKGLCNKYDVYMMSATQLNGDWKEA
WLKGQVIDASYLRGSKAIADKTDAAMIILPLSKKEKDAIDPILKEGFYPEPNFVTHVFKNRGNEYDKVKVFSHINMGNMR
IKDCFTTNLDNELITVEKLNIKAG
>Mature_504_residues
MLQDKQAIIQVLGSILKDPTILSESNKYKITSDDFPSRFHSILFFAMSNLFHQGTEVLNDVEIDGYLKDYDIQYKIFHDN
KGLEYIEKIQELAVVENFDYHYKRLKKFSLLREMDGLGFDIKEIYDESLIDPKEQEKMQEQFDKKSIDEILTAYEMKIVD
IKEKFRTSSESVGIQGGEGINELLDSFEESPDIGVPLNSEMLTSIFRGSRKKKFYLRSSITGGGKTRNMVADACRLSATE
LYDPKKKEWVSNPWSESSTVISTEMMAEELQSLALAYISSVEEKKILRNTINEKEKQLVRKAAKVLQESNIWFEHLPDFN
IQEIERTIEKNVIKNNVEYVYFDYIHSSVTIFSEMSKKSGVNLREDQILLLMSDKLKGLCNKYDVYMMSATQLNGDWKEA
WLKGQVIDASYLRGSKAIADKTDAAMIILPLSKKEKDAIDPILKEGFYPEPNFVTHVFKNRGNEYDKVKVFSHINMGNMR
IKDCFTTNLDNELITVEKLNIKAG

Specific function: Unknown

COG id: COG0305

COG function: function code L; Replicative DNA helicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YORI_BACSU (O31905)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389919.1
- ProteinModelPortal:   O31905
- EnsemblBacteria:   EBBACT00000003210
- GeneID:   939707
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20370
- NMPDR:   fig|224308.1.peg.2042
- GenoList:   BSU20370
- OMA:   REENEAF
- ProtClustDB:   CLSK254599
- BioCyc:   BSUB:BSU20370-MONOMER
- InterPro:   IPR007694
- InterPro:   IPR007693

Pfam domain/function: PF03796 DnaB_C; SSF48024 DNA_helicase_DnaB-like_N

EC number: NA

Molecular weight: Translated: 58133; Mature: 58133

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQDKQAIIQVLGSILKDPTILSESNKYKITSDDFPSRFHSILFFAMSNLFHQGTEVLND
CCCHHHHHHHHHHHHHCCCCEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
VEIDGYLKDYDIQYKIFHDNKGLEYIEKIQELAVVENFDYHYKRLKKFSLLREMDGLGFD
CCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
IKEIYDESLIDPKEQEKMQEQFDKKSIDEILTAYEMKIVDIKEKFRTSSESVGIQGGEGI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCCCCCCCCCH
NELLDSFEESPDIGVPLNSEMLTSIFRGSRKKKFYLRSSITGGGKTRNMVADACRLSATE
HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
LYDPKKKEWVSNPWSESSTVISTEMMAEELQSLALAYISSVEEKKILRNTINEKEKQLVR
HCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAAKVLQESNIWFEHLPDFNIQEIERTIEKNVIKNNVEYVYFDYIHSSVTIFSEMSKKSG
HHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCC
VNLREDQILLLMSDKLKGLCNKYDVYMMSATQLNGDWKEAWLKGQVIDASYLRGSKAIAD
CCCCCCCEEEEECHHHHHHHCCCCEEEEEEHHCCCCHHHHHHCCCEECHHHHCCCCHHCC
KTDAAMIILPLSKKEKDAIDPILKEGFYPEPNFVTHVFKNRGNEYDKVKVFSHINMGNMR
CCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEE
IKDCFTTNLDNELITVEKLNIKAG
EHHHHHCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MLQDKQAIIQVLGSILKDPTILSESNKYKITSDDFPSRFHSILFFAMSNLFHQGTEVLND
CCCHHHHHHHHHHHHHCCCCEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
VEIDGYLKDYDIQYKIFHDNKGLEYIEKIQELAVVENFDYHYKRLKKFSLLREMDGLGFD
CCCCCEEECCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
IKEIYDESLIDPKEQEKMQEQFDKKSIDEILTAYEMKIVDIKEKFRTSSESVGIQGGEGI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCCCCCCCCCCH
NELLDSFEESPDIGVPLNSEMLTSIFRGSRKKKFYLRSSITGGGKTRNMVADACRLSATE
HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
LYDPKKKEWVSNPWSESSTVISTEMMAEELQSLALAYISSVEEKKILRNTINEKEKQLVR
HCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAAKVLQESNIWFEHLPDFNIQEIERTIEKNVIKNNVEYVYFDYIHSSVTIFSEMSKKSG
HHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCC
VNLREDQILLLMSDKLKGLCNKYDVYMMSATQLNGDWKEAWLKGQVIDASYLRGSKAIAD
CCCCCCCEEEEECHHHHHHHCCCCEEEEEEHHCCCCHHHHHHCCCEECHHHHCCCCHHCC
KTDAAMIILPLSKKEKDAIDPILKEGFYPEPNFVTHVFKNRGNEYDKVKVFSHINMGNMR
CCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEE
IKDCFTTNLDNELITVEKLNIKAG
EHHHHHCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377