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The map label for this gene is yorM

Identifier: 16079092

GI number: 16079092

Start: 2174852

End: 2175568

Strand: Reverse

Name: yorM

Synonym: BSU20330

Alternate gene names: 16079092

Gene position: 2175568-2174852 (Counterclockwise)

Preceding gene: 16079093

Following gene: 16079091

Centisome position: 51.61

GC content: 32.64

Gene sequence:

>717_bases
ATTTTCAAAAAACTTATAGACAAACATAAAAAATATGTATATCATAGAATTAACAAAATGGCACTTTTTGCTACAATTGG
TTTGTTAGGAGTAGGGCTCGTATATAGCGCTAAAAACTTGTATACACATCAAGATAATCAAGTCTCAATAAAAAAGTCAT
TTTATTTAAATAAAAAAGAGGTGAGGCAAAAACTTATTCACGAAATTGACGTTCCAAGAATCCTTCCTAGGCTAAAGAGT
GAGGAAGAAAAGCAGGCTGAAAGTAGAAAAAAGTATCTTAATGCGACAATTACATATCTAACAGAAGAAAATAAAAAAGC
AGCAAAACATACAAAAACAAAAAAAGTGCAAAAAACCAATACAAAGAGAAATCTTGATAAAGCAGTTTCAAAAAGTACAA
ATGCAAAGGCAGTGAAGAGTCATGAAGTTGTTGCTACTGCTTATACTGCGTTTTGCTCTACAGGGTGCACAGGGAAAACA
AGAACCGGCTACGATGTATCAAACACATCCTATTACAATGGAAAAAGAATAATTGCTGTTGATCCAGAAGTAATTCCTTT
GTATTCATTAGTGCAAGTTTCATATGAAGGAAATAGCTTTCAAGCATATGCAATAGATACAGGAGGGGACATTAAAAACA
ATCGTATTGATATTCTAATGGACAGTGAGCAAGAAGCAAATGCATTTGGTCGTAAAAATGTAAGAGTAAGCTGGTAA

Upstream 100 bases:

>100_bases
CACAGTCTGCAGAATAGATTTTGTTGATAATGAAGGAAGTATGAGTTTGACAACTAAAAGGGCAGAAATATAAATCTTAA
CTGATATAGGAGAGATAAAA

Downstream 100 bases:

>100_bases
ATCGATCCAAATGACTGAAAGGTATAAACATTTCAACAATTCGTTCGATGCAATACATAACATGAAATTTATCCCAAGGA
AAACTATTACATAGAGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MFKKLIDKHKKYVYHRINKMALFATIGLLGVGLVYSAKNLYTHQDNQVSIKKSFYLNKKEVRQKLIHEIDVPRILPRLKS
EEEKQAESRKKYLNATITYLTEENKKAAKHTKTKKVQKTNTKRNLDKAVSKSTNAKAVKSHEVVATAYTAFCSTGCTGKT
RTGYDVSNTSYYNGKRIIAVDPEVIPLYSLVQVSYEGNSFQAYAIDTGGDIKNNRIDILMDSEQEANAFGRKNVRVSW

Sequences:

>Translated_238_residues
MFKKLIDKHKKYVYHRINKMALFATIGLLGVGLVYSAKNLYTHQDNQVSIKKSFYLNKKEVRQKLIHEIDVPRILPRLKS
EEEKQAESRKKYLNATITYLTEENKKAAKHTKTKKVQKTNTKRNLDKAVSKSTNAKAVKSHEVVATAYTAFCSTGCTGKT
RTGYDVSNTSYYNGKRIIAVDPEVIPLYSLVQVSYEGNSFQAYAIDTGGDIKNNRIDILMDSEQEANAFGRKNVRVSW
>Mature_238_residues
MFKKLIDKHKKYVYHRINKMALFATIGLLGVGLVYSAKNLYTHQDNQVSIKKSFYLNKKEVRQKLIHEIDVPRILPRLKS
EEEKQAESRKKYLNATITYLTEENKKAAKHTKTKKVQKTNTKRNLDKAVSKSTNAKAVKSHEVVATAYTAFCSTGCTGKT
RTGYDVSNTSYYNGKRIIAVDPEVIPLYSLVQVSYEGNSFQAYAIDTGGDIKNNRIDILMDSEQEANAFGRKNVRVSW

Specific function: Unknown

COG id: COG3584

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YORM_BACSU (O31901)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_389915.1
- ProteinModelPortal:   O31901
- SMR:   O31901
- EnsemblBacteria:   EBBACT00000003258
- GeneID:   939539
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU20330
- NMPDR:   fig|224308.1.peg.2038
- GenoList:   BSU20330
- GeneTree:   EBGT00070000032031
- OMA:   VESTAYS
- BioCyc:   BSUB:BSU20330-MONOMER
- InterPro:   IPR010611

Pfam domain/function: PF06725 3D

EC number: NA

Molecular weight: Translated: 27095; Mature: 27095

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKLIDKHKKYVYHRINKMALFATIGLLGVGLVYSAKNLYTHQDNQVSIKKSFYLNKKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEHHHHCCCHHH
VRQKLIHEIDVPRILPRLKSEEEKQAESRKKYLNATITYLTEENKKAAKHTKTKKVQKTN
HHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHC
TKRNLDKAVSKSTNAKAVKSHEVVATAYTAFCSTGCTGKTRTGYDVSNTSYYNGKRIIAV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCEEEEE
DPEVIPLYSLVQVSYEGNSFQAYAIDTGGDIKNNRIDILMDSEQEANAFGRKNVRVSW
CCCHHHHEEEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHCCCCCCEECC
>Mature Secondary Structure
MFKKLIDKHKKYVYHRINKMALFATIGLLGVGLVYSAKNLYTHQDNQVSIKKSFYLNKKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEHHHHCCCHHH
VRQKLIHEIDVPRILPRLKSEEEKQAESRKKYLNATITYLTEENKKAAKHTKTKKVQKTN
HHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHC
TKRNLDKAVSKSTNAKAVKSHEVVATAYTAFCSTGCTGKTRTGYDVSNTSYYNGKRIIAV
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCEEEEE
DPEVIPLYSLVQVSYEGNSFQAYAIDTGGDIKNNRIDILMDSEQEANAFGRKNVRVSW
CCCHHHHEEEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377