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The map label for this gene is yotL

Identifier: 16079042

GI number: 16079042

Start: 2152927

End: 2153169

Strand: Direct

Name: yotL

Synonym: BSU19840

Alternate gene names: 16079042

Gene position: 2152927-2153169 (Clockwise)

Preceding gene: 255767464

Following gene: 16079053

Centisome position: 51.07

GC content: 32.92

Gene sequence:

>243_bases
GTGAAAAAACAATGGAAACCAGTTGATTCAAGACTCAATGAGCTCATGCATGAATATAGCGTTTCAATTGAAGATCTTGT
TGAATGTACTGGATTATCAAAACAACGTATTAATGATTATGTAGGTGGTTTTAAATCAAATATGAATATTGGAACAGCAA
TGACATTTGCTGATGCCATAGGTTGCTCTATAGAAGAGCTTTATGTATGGAACTTTAAAGAGCGCAGACAATTAACCAAA
TAA

Upstream 100 bases:

>100_bases
ACTTTCCCTTGATTGTTTGCTCCCAATCAATCACTCTCCTAATCTATATTGAAGGTAAATTATGTATGTGCTAAAATCGT
TGCTGAAAGAGGTGTGCATA

Downstream 100 bases:

>100_bases
CTTATAATATGGTTCCCTTTTTGACCCACCTTATTTCCTGCATTAATTCCTCATTATTGTCAGCCAAGTTAATTAAGTTA
CGATGTGCTCTTTGCAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MKKQWKPVDSRLNELMHEYSVSIEDLVECTGLSKQRINDYVGGFKSNMNIGTAMTFADAIGCSIEELYVWNFKERRQLTK

Sequences:

>Translated_80_residues
MKKQWKPVDSRLNELMHEYSVSIEDLVECTGLSKQRINDYVGGFKSNMNIGTAMTFADAIGCSIEELYVWNFKERRQLTK
>Mature_80_residues
MKKQWKPVDSRLNELMHEYSVSIEDLVECTGLSKQRINDYVGGFKSNMNIGTAMTFADAIGCSIEELYVWNFKERRQLTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOTL_BACSU (O31865)

Other databases:

- EMBL:   AF006665
- EMBL:   AL009126
- RefSeq:   NP_389865.1
- ProteinModelPortal:   O31865
- SMR:   O31865
- EnsemblBacteria:   EBBACT00000003587
- GeneID:   940077
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19840
- NMPDR:   fig|224308.1.peg.1988
- GenoList:   BSU19840
- ProtClustDB:   CLSK337190
- BioCyc:   BSUB:BSU19840-MONOMER
- GO:   GO:0006350
- InterPro:   IPR001387
- InterPro:   IPR010982
- SMART:   SM00530

Pfam domain/function: SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 9294; Mature: 9294

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQWKPVDSRLNELMHEYSVSIEDLVECTGLSKQRINDYVGGFKSNMNIGTAMTFADAI
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH
GCSIEELYVWNFKERRQLTK
CCCHHHHHCCCCHHHHCCCC
>Mature Secondary Structure
MKKQWKPVDSRLNELMHEYSVSIEDLVECTGLSKQRINDYVGGFKSNMNIGTAMTFADAI
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHH
GCSIEELYVWNFKERRQLTK
CCCHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377