Click here to switch to the map view.

The map label for this gene is cgeD

Identifier: 16079034

GI number: 16079034

Start: 2146821

End: 2148101

Strand: Reverse

Name: cgeD

Synonym: BSU19760

Alternate gene names: 16079034

Gene position: 2148101-2146821 (Counterclockwise)

Preceding gene: 16079035

Following gene: 16079033

Centisome position: 50.96

GC content: 40.36

Gene sequence:

>1281_bases
ATGGGAGAGAAAGTGTCTATTATTTTAACAAGTTACAACAAACCCGATTATTTGCAAAAAGCGATCGAAAGCGTGATACA
GCAAACGCATGATCTTTGGGAGCTTTTTATCATGGATGATCATTCGAATGCAGAAACAACTGCGGTGATTCACAAGTATC
TCCATGACCGGCGCATTCAATATCATAACAGTTTCGTGCATCCTGCAGATCGATTAAAAACAGCCCGTTATGCCACATTA
ATTAACAGTGCGCTCCCATTTGCAGACGGCGATTACATTTCCTATCTTACTGACGACACTGTTTATCATCCTGAGCGGCT
GAGCCGTATGGTGCAAGAGTTTTCACATAAGCCTGAAGCGCAGGCGGTCTATTCAAAACAAAAAGTTGTACATGTAAACG
AAAGGGGAGAGGAAATCTCACATTTCTACAGAAATGCCAATGCAGTGCTTGATCAGGCCGCTTTTCAAGTTGATCATTGC
TCAGTTATGCATCGCCGTTCGTTACTTAATCTCATTCACCATAAATTTGGAGGCTACTGGGATGATGATATGAAGCATTG
GAATCATGGCGACGCAATTTTTTGGGCGAGACTCAACAACTTTACCCCATTTCTGCCGATAAATGAAGTATTAGACACAA
CCTATAAAACCCCAGATTCATTTCAAAATGCATATCGGTTTCTGCCCGCCGATTTGATTGACGGCTCTTTTGTAAAAGGT
TCAGATCAAAATGTGTATTTTTTTGATCAGGGTGTAAGGCATCCTGTTGGAGAAAAGTGGGGTTTTTTGTATCTAAATCG
GACTGTCGCTGTTCCAGACCCATATTTATTCCAATATAGGATTGGCAAAATTTTAAACATTCCGAATTATATTTTAGTAA
AGGAAGCTGACCATCCTGCAATATTTTATATCGAAGCCGGAAAAAAAAGGCGAATTGTGGACCAGTATGCGTTTCAATTT
TATCAATTTCAAAGAAAAGACATAGTGACAATTGGAAAAGAAGAGATGGAGACGCTTCCGGAAGGGCCGCCGATTACGTG
GAAACGATCTGAATTGATCAAAAATCCGCCTGGCCGACGTCTGTTTTTCATCGAACGCGAGCCGTTTTTGTTTCTAAACG
GCGTCTTTCACCCGATTAGTGAACAAGTAACAAGGAAGTTTTTTTTACATCAGAAGCCAATCTCCGCTTCTTTCCGAAAT
ATTCAGCAATTTCCAATTGGAAAGCCGTTTTATCCGGTGTACGATGAGATTATAAAGAAATTGAATATTGCAACAGAGTA
A

Upstream 100 bases:

>100_bases
TCACTCTCAAGTGTTGTAAGCTGGGGTGCTTTTTAAATGATGACAGAGGCTCTGCTTGCTGCGGAGCCGTTTTTATGTTT
GACGGCGGGAGGCGGTATAG

Downstream 100 bases:

>100_bases
AGGTATAGGTCATAAAAAGGAGACGTTCATGACAGGACATTATTCAAAAACGGAACATCAATATATATTGTTAACGTCTG
AATCGGCATCGTTTGATCAT

Product: spore coat maturation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MGEKVSIILTSYNKPDYLQKAIESVIQQTHDLWELFIMDDHSNAETTAVIHKYLHDRRIQYHNSFVHPADRLKTARYATL
INSALPFADGDYISYLTDDTVYHPERLSRMVQEFSHKPEAQAVYSKQKVVHVNERGEEISHFYRNANAVLDQAAFQVDHC
SVMHRRSLLNLIHHKFGGYWDDDMKHWNHGDAIFWARLNNFTPFLPINEVLDTTYKTPDSFQNAYRFLPADLIDGSFVKG
SDQNVYFFDQGVRHPVGEKWGFLYLNRTVAVPDPYLFQYRIGKILNIPNYILVKEADHPAIFYIEAGKKRRIVDQYAFQF
YQFQRKDIVTIGKEEMETLPEGPPITWKRSELIKNPPGRRLFFIEREPFLFLNGVFHPISEQVTRKFFLHQKPISASFRN
IQQFPIGKPFYPVYDEIIKKLNIATE

Sequences:

>Translated_426_residues
MGEKVSIILTSYNKPDYLQKAIESVIQQTHDLWELFIMDDHSNAETTAVIHKYLHDRRIQYHNSFVHPADRLKTARYATL
INSALPFADGDYISYLTDDTVYHPERLSRMVQEFSHKPEAQAVYSKQKVVHVNERGEEISHFYRNANAVLDQAAFQVDHC
SVMHRRSLLNLIHHKFGGYWDDDMKHWNHGDAIFWARLNNFTPFLPINEVLDTTYKTPDSFQNAYRFLPADLIDGSFVKG
SDQNVYFFDQGVRHPVGEKWGFLYLNRTVAVPDPYLFQYRIGKILNIPNYILVKEADHPAIFYIEAGKKRRIVDQYAFQF
YQFQRKDIVTIGKEEMETLPEGPPITWKRSELIKNPPGRRLFFIEREPFLFLNGVFHPISEQVTRKFFLHQKPISASFRN
IQQFPIGKPFYPVYDEIIKKLNIATE
>Mature_425_residues
GEKVSIILTSYNKPDYLQKAIESVIQQTHDLWELFIMDDHSNAETTAVIHKYLHDRRIQYHNSFVHPADRLKTARYATLI
NSALPFADGDYISYLTDDTVYHPERLSRMVQEFSHKPEAQAVYSKQKVVHVNERGEEISHFYRNANAVLDQAAFQVDHCS
VMHRRSLLNLIHHKFGGYWDDDMKHWNHGDAIFWARLNNFTPFLPINEVLDTTYKTPDSFQNAYRFLPADLIDGSFVKGS
DQNVYFFDQGVRHPVGEKWGFLYLNRTVAVPDPYLFQYRIGKILNIPNYILVKEADHPAIFYIEAGKKRRIVDQYAFQFY
QFQRKDIVTIGKEEMETLPEGPPITWKRSELIKNPPGRRLFFIEREPFLFLNGVFHPISEQVTRKFFLHQKPISASFRNI
QQFPIGKPFYPVYDEIIKKLNIATE

Specific function: May be involved in maturation of the outermost layer of the spore

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spore coat polysaccharide biosynthesis protein spsA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CGED_BACSU (P42092)

Other databases:

- EMBL:   U18421
- EMBL:   AF015775
- EMBL:   AF006665
- EMBL:   AL009126
- PIR:   C69598
- RefSeq:   NP_389857.1
- ProteinModelPortal:   P42092
- SMR:   P42092
- EnsemblBacteria:   EBBACT00000002093
- GeneID:   940063
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19760
- NMPDR:   fig|224308.1.peg.1980
- GenoList:   BSU19760
- GeneTree:   EBGT00070000032319
- HOGENOM:   HBG338092
- OMA:   CSVMHRR
- ProtClustDB:   CLSK873590
- BioCyc:   BSUB:BSU19760-MONOMER
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: NA

Molecular weight: Translated: 50071; Mature: 49940

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEKVSIILTSYNKPDYLQKAIESVIQQTHDLWELFIMDDHSNAETTAVIHKYLHDRRIQ
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHH
YHNSFVHPADRLKTARYATLINSALPFADGDYISYLTDDTVYHPERLSRMVQEFSHKPEA
HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCH
QAVYSKQKVVHVNERGEEISHFYRNANAVLDQAAFQVDHCSVMHRRSLLNLIHHKFGGYW
HHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
DDDMKHWNHGDAIFWARLNNFTPFLPINEVLDTTYKTPDSFQNAYRFLPADLIDGSFVKG
CHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCEECC
SDQNVYFFDQGVRHPVGEKWGFLYLNRTVAVPDPYLFQYRIGKILNIPNYILVKEADHPA
CCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCE
IFYIEAGKKRRIVDQYAFQFYQFQRKDIVTIGKEEMETLPEGPPITWKRSELIKNPPGRR
EEEEECCCCCHHHHHHHHHHHHHHCCCCEEECHHHHHHCCCCCCCCCCHHHHHCCCCCCE
LFFIEREPFLFLNGVFHPISEQVTRKFFLHQKPISASFRNIQQFPIGKPFYPVYDEIIKK
EEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
LNIATE
HCCCCC
>Mature Secondary Structure 
GEKVSIILTSYNKPDYLQKAIESVIQQTHDLWELFIMDDHSNAETTAVIHKYLHDRRIQ
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHH
YHNSFVHPADRLKTARYATLINSALPFADGDYISYLTDDTVYHPERLSRMVQEFSHKPEA
HCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCH
QAVYSKQKVVHVNERGEEISHFYRNANAVLDQAAFQVDHCSVMHRRSLLNLIHHKFGGYW
HHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
DDDMKHWNHGDAIFWARLNNFTPFLPINEVLDTTYKTPDSFQNAYRFLPADLIDGSFVKG
CHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCEECC
SDQNVYFFDQGVRHPVGEKWGFLYLNRTVAVPDPYLFQYRIGKILNIPNYILVKEADHPA
CCCEEEEECCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCE
IFYIEAGKKRRIVDQYAFQFYQFQRKDIVTIGKEEMETLPEGPPITWKRSELIKNPPGRR
EEEEECCCCCHHHHHHHHHHHHHHCCCCEEECHHHHHHCCCCCCCCCCHHHHHCCCCCCE
LFFIEREPFLFLNGVFHPISEQVTRKFFLHQKPISASFRNIQQFPIGKPFYPVYDEIIKK
EEEEECCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH
LNIATE
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7592393; 9734814; 9384377