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The map label for this gene is yodN

Identifier: 16079025

GI number: 16079025

Start: 2138037

End: 2138717

Strand: Reverse

Name: yodN

Synonym: BSU19670

Alternate gene names: 16079025

Gene position: 2138717-2138037 (Counterclockwise)

Preceding gene: 16079026

Following gene: 16079024

Centisome position: 50.73

GC content: 37.44

Gene sequence:

>681_bases
ATGAAGCAAAATAAACCGAAATTCCAAGTAGGGGATATCGTAGTCGTCATTATGTATGGAACAGTCGGCACCATCACAAA
AGTACACCAAATTGATAAACACTATCTTTATGAAGTCAATCATAACGAAGTTTTATACTTTGAATCATCTATTCAGCTTT
ATAAAGATTATGAGGGTGTCATTGTCGACATGGAGAAGCTTGATATTGAGTATGAATTCCTTATTGGGGACGTTGTTTAT
GTTAAAGATTATGGAAAAGAACTCTTTCGCATTATCGGCCATAGAACAGAAATTTGGAGATATTTAGAAGATGGCTGGGA
AGATATCATTTATGAGCTGACCCGTTTAAAGGATGGAGAGTGGCTTGAAACGGAGGAAGAGGATCTCACGCTGGTGCTTA
GAAAATATGAAATGGACCAGTTTGTGCATCAGCTGTTGTTTGTCCATTATGTCGGAGAAACTGGCCATGAGATCGGCGAA
GATATCGCATCGTCTGCTCTTCTTCAGTTTGAAGGCGGTGATGAAGATCAAGATACCCTTCACATCCTTGCTGTGTCAAT
TGTTGATGAGCTTCTGGATATTTATAATGACTACAAAATTCTGTACGAAATGTTTCAGGATGAAGAATATAAAGACATGA
TGATGTTTGTTTTGGAAAGTTTAAAAGAGCATTTCAGTTAA

Upstream 100 bases:

>100_bases
ACCATAATTGGATATTTCCTTTGGTTTTCATGCCCATGCGAATTGGCTTCACCCGGCATACGATAGCGTATGAGAAATGT
TGCGGCGAGGGGGAGACACC

Downstream 100 bases:

>100_bases
TTTGTGAACATACGGATCAAGACATATAAAAAATATGGCAGACAGCCCCAAATCATCACACGCGTCATTCCTTTGAGCGT
TTTTTCCATTATGATATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKQNKPKFQVGDIVVVIMYGTVGTITKVHQIDKHYLYEVNHNEVLYFESSIQLYKDYEGVIVDMEKLDIEYEFLIGDVVY
VKDYGKELFRIIGHRTEIWRYLEDGWEDIIYELTRLKDGEWLETEEEDLTLVLRKYEMDQFVHQLLFVHYVGETGHEIGE
DIASSALLQFEGGDEDQDTLHILAVSIVDELLDIYNDYKILYEMFQDEEYKDMMMFVLESLKEHFS

Sequences:

>Translated_226_residues
MKQNKPKFQVGDIVVVIMYGTVGTITKVHQIDKHYLYEVNHNEVLYFESSIQLYKDYEGVIVDMEKLDIEYEFLIGDVVY
VKDYGKELFRIIGHRTEIWRYLEDGWEDIIYELTRLKDGEWLETEEEDLTLVLRKYEMDQFVHQLLFVHYVGETGHEIGE
DIASSALLQFEGGDEDQDTLHILAVSIVDELLDIYNDYKILYEMFQDEEYKDMMMFVLESLKEHFS
>Mature_226_residues
MKQNKPKFQVGDIVVVIMYGTVGTITKVHQIDKHYLYEVNHNEVLYFESSIQLYKDYEGVIVDMEKLDIEYEFLIGDVVY
VKDYGKELFRIIGHRTEIWRYLEDGWEDIIYELTRLKDGEWLETEEEDLTLVLRKYEMDQFVHQLLFVHYVGETGHEIGE
DIASSALLQFEGGDEDQDTLHILAVSIVDELLDIYNDYKILYEMFQDEEYKDMMMFVLESLKEHFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YODN_BACSU (O34414)

Other databases:

- EMBL:   AF015775
- EMBL:   AF006665
- EMBL:   AL009126
- PIR:   A69904
- RefSeq:   NP_389848.1
- ProteinModelPortal:   O34414
- EnsemblBacteria:   EBBACT00000000989
- GeneID:   940037
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19670
- NMPDR:   fig|224308.1.peg.1971
- GenoList:   BSU19670
- GeneTree:   EBGT00050000001660
- HOGENOM:   HBG338086
- OMA:   RTEIWRY
- ProtClustDB:   CLSK887436
- BioCyc:   BSUB:BSU19670-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26930; Mature: 26930

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNKPKFQVGDIVVVIMYGTVGTITKVHQIDKHYLYEVNHNEVLYFESSIQLYKDYEGV
CCCCCCCEEECCEEEEEEECCHHHHHHHHHHHHHHEEEECCCEEEEEECCHHHHCCCCCE
IVDMEKLDIEYEFLIGDVVYVKDYGKELFRIIGHRTEIWRYLEDGWEDIIYELTRLKDGE
EEEHHHHCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
WLETEEEDLTLVLRKYEMDQFVHQLLFVHYVGETGHEIGEDIASSALLQFEGGDEDQDTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCHHH
HILAVSIVDELLDIYNDYKILYEMFQDEEYKDMMMFVLESLKEHFS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQNKPKFQVGDIVVVIMYGTVGTITKVHQIDKHYLYEVNHNEVLYFESSIQLYKDYEGV
CCCCCCCEEECCEEEEEEECCHHHHHHHHHHHHHHEEEECCCEEEEEECCHHHHCCCCCE
IVDMEKLDIEYEFLIGDVVYVKDYGKELFRIIGHRTEIWRYLEDGWEDIIYELTRLKDGE
EEEHHHHCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
WLETEEEDLTLVLRKYEMDQFVHQLLFVHYVGETGHEIGEDIASSALLQFEGGDEDQDTL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCHHH
HILAVSIVDELLDIYNDYKILYEMFQDEEYKDMMMFVLESLKEHFS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377