Click here to switch to the map view.

The map label for this gene is yojN

Identifier: 16078999

GI number: 16078999

Start: 2113764

End: 2114678

Strand: Reverse

Name: yojN

Synonym: BSU19390

Alternate gene names: 16078999

Gene position: 2114678-2113764 (Counterclockwise)

Preceding gene: 16079000

Following gene: 255767454

Centisome position: 50.16

GC content: 42.73

Gene sequence:

>915_bases
ATGAATAGGAAAGGGAATCTGTCTATGACAACTCAACTACAGCACTTAACATTGCCGGAAGATATACAACAAAAGCTTTT
ATCATATAAAGAGCAGCCTATTTCCCCAGAGTTTCAATCGCTTATAGGAACATCAGGCTATGAGGCGGAGGATGAAGCCA
TTTTATTTGACGCCATTATTGCATTAGCCATGGGGAAAAATGTCCTGCTGAAAGGGCCTACAGGTTCAGGAAAAACAAAG
CTGGCAGAAACATTGTCCAGCTATTTTCATAAACCGATGCACAGCGTCAACTGTTCAGTCGACTTGGACGCTGAGGCATT
GGTCGGTTATAAAACGATTGAAAATCAATCTGGCCAGGCAACAATCGAGTTTGTTTCAGGACCTGTTACAAAGGCAATGA
AGGAAGGCCATTTTCTTTATATAGATGAAATCAATATGGCGAAGCCGGAAACACTGCCTATTCTAAACGGTGTATTAGAT
TACAGAAAAATGATGACAAATCCGTTTACAGGCGAGGTCATACGGGCTAAAAGCGGTTTCGGAGTCATTGCAGCCATCAA
TGAAGGCTATGTCGGAACTGTTCCTCTGAATGAAGCGTTGAAAAACCGTTTTGTCATCATTGATGTGCCTTATATTAAAG
GCGAGCTGCTGAAACAAGTGCTCATGTCTCAGTCAGCCTTGAAAGACGAGAAATTGATTGACAGATTTATCACGCTTTCC
TCTGACTTGATCGTTCAGGCCAATAACGGACAGGTGTCTGAAGAAGCGGCATCCATCAGAGCTTTAATCGATACATGTGA
TTTAGCTGCTTATATTCCGCCGCGTCGTGCCATTGAGCGGGGAATTGTAGAAAAGCTTGATGATGATCGGGAAAAAGCGG
CTGTCCGAAATATTGCAGAAACTCTGTTTGAATGA

Upstream 100 bases:

>100_bases
CTGCGGAGCCCTTTTGGGAAATAACGAGAAGCAGTAATATCATCCAGGCCCTTTTGTATTGAGCATACAGGGGCTTTTTT
AGTATACTCGTTAATGGAAT

Downstream 100 bases:

>100_bases
GGGGGCTGCGATGAAATTTATCAAATTTAACGACAGCACGATTGATTCATTTTTATTTATGATGCTGACTGATTTGGCCA
AAACACTCACCAAGAGTGAA

Product: nitric-oxide reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MNRKGNLSMTTQLQHLTLPEDIQQKLLSYKEQPISPEFQSLIGTSGYEAEDEAILFDAIIALAMGKNVLLKGPTGSGKTK
LAETLSSYFHKPMHSVNCSVDLDAEALVGYKTIENQSGQATIEFVSGPVTKAMKEGHFLYIDEINMAKPETLPILNGVLD
YRKMMTNPFTGEVIRAKSGFGVIAAINEGYVGTVPLNEALKNRFVIIDVPYIKGELLKQVLMSQSALKDEKLIDRFITLS
SDLIVQANNGQVSEEAASIRALIDTCDLAAYIPPRRAIERGIVEKLDDDREKAAVRNIAETLFE

Sequences:

>Translated_304_residues
MNRKGNLSMTTQLQHLTLPEDIQQKLLSYKEQPISPEFQSLIGTSGYEAEDEAILFDAIIALAMGKNVLLKGPTGSGKTK
LAETLSSYFHKPMHSVNCSVDLDAEALVGYKTIENQSGQATIEFVSGPVTKAMKEGHFLYIDEINMAKPETLPILNGVLD
YRKMMTNPFTGEVIRAKSGFGVIAAINEGYVGTVPLNEALKNRFVIIDVPYIKGELLKQVLMSQSALKDEKLIDRFITLS
SDLIVQANNGQVSEEAASIRALIDTCDLAAYIPPRRAIERGIVEKLDDDREKAAVRNIAETLFE
>Mature_304_residues
MNRKGNLSMTTQLQHLTLPEDIQQKLLSYKEQPISPEFQSLIGTSGYEAEDEAILFDAIIALAMGKNVLLKGPTGSGKTK
LAETLSSYFHKPMHSVNCSVDLDAEALVGYKTIENQSGQATIEFVSGPVTKAMKEGHFLYIDEINMAKPETLPILNGVLD
YRKMMTNPFTGEVIRAKSGFGVIAAINEGYVGTVPLNEALKNRFVIIDVPYIKGELLKQVLMSQSALKDEKLIDRFITLS
SDLIVQANNGQVSEEAASIRALIDTCDLAAYIPPRRAIERGIVEKLDDDREKAAVRNIAETLFE

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbbQ/NirQ/NorQ/GpvN family

Homologues:

Organism=Homo sapiens, GI24415404, Length=168, Percent_Identity=30.3571428571429, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI25145616, Length=163, Percent_Identity=31.9018404907975, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323135, Length=127, Percent_Identity=34.6456692913386, Blast_Score=66, Evalue=5e-12,
Organism=Drosophila melanogaster, GI161076562, Length=157, Percent_Identity=32.484076433121, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI161076560, Length=157, Percent_Identity=32.484076433121, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOJN_BACSU (O31850)

Other databases:

- EMBL:   AF026147
- EMBL:   AL009126
- PIR:   C69907
- RefSeq:   NP_389821.1
- ProteinModelPortal:   O31850
- SMR:   O31850
- EnsemblBacteria:   EBBACT00000002883
- GeneID:   939458
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19390
- NMPDR:   fig|224308.1.peg.1944
- GenoList:   BSU19390
- GeneTree:   EBGT00050000002829
- HOGENOM:   HBG313536
- OMA:   HSVNCSV
- ProtClustDB:   CLSK885334
- BioCyc:   BSUB:BSU19390-MONOMER
- InterPro:   IPR003593
- InterPro:   IPR011704
- InterPro:   IPR001270
- PRINTS:   PR00300
- SMART:   SM00382

Pfam domain/function: PF07728 AAA_5

EC number: NA

Molecular weight: Translated: 33481; Mature: 33481

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKGNLSMTTQLQHLTLPEDIQQKLLSYKEQPISPEFQSLIGTSGYEAEDEAILFDAII
CCCCCCCEEEEEHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHH
ALAMGKNVLLKGPTGSGKTKLAETLSSYFHKPMHSVNCSVDLDAEALVGYKTIENQSGQA
HHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCEECCHHHHHHHHHHCCCCCCE
TIEFVSGPVTKAMKEGHFLYIDEINMAKPETLPILNGVLDYRKMMTNPFTGEVIRAKSGF
EEEEECCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCC
GVIAAINEGYVGTVPLNEALKNRFVIIDVPYIKGELLKQVLMSQSALKDEKLIDRFITLS
EEEEEECCCEEEECCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SDLIVQANNGQVSEEAASIRALIDTCDLAAYIPPRRAIERGIVEKLDDDREKAAVRNIAE
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
TLFE
HHCC
>Mature Secondary Structure
MNRKGNLSMTTQLQHLTLPEDIQQKLLSYKEQPISPEFQSLIGTSGYEAEDEAILFDAII
CCCCCCCEEEEEHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHH
ALAMGKNVLLKGPTGSGKTKLAETLSSYFHKPMHSVNCSVDLDAEALVGYKTIENQSGQA
HHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCEECCHHHHHHHHHHCCCCCCE
TIEFVSGPVTKAMKEGHFLYIDEINMAKPETLPILNGVLDYRKMMTNPFTGEVIRAKSGF
EEEEECCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCC
GVIAAINEGYVGTVPLNEALKNRFVIIDVPYIKGELLKQVLMSQSALKDEKLIDRFITLS
EEEEEECCCEEEECCHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SDLIVQANNGQVSEEAASIRALIDTCDLAAYIPPRRAIERGIVEKLDDDREKAAVRNIAE
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
TLFE
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377