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The map label for this gene is yobF

Identifier: 16078949

GI number: 16078949

Start: 2058715

End: 2059638

Strand: Reverse

Name: yobF

Synonym: BSU18890

Alternate gene names: 16078949

Gene position: 2059638-2058715 (Counterclockwise)

Preceding gene: 255767445

Following gene: 255767444

Centisome position: 48.86

GC content: 34.52

Gene sequence:

>924_bases
ATGTTAGTGTATATAGGAAATGGCCATTACTGTTATTCAAATTCAACTGCAATGTTTCTTTCATCAATAGGAGAAAATGT
ATCTCCTCAACTTGTAGAGATATTAACTGGTGTTGGGTTAGGTGCCATGATAGAATATGAAAAAAACCTTTATTTTAGTA
TGAGAGATCCTGATGATGGTATCAATTATGCTTTAAACATCCTTGGATTTACTGCAGAAGAACATCAGCAAGCTAGTGAC
TTAGATGACCCATTTCCGTTATTAAAACAGCAAATCAAACAAAACCCTGTCATTCTAGGCCCTTTAGATATGGGGGAGCT
AACATACCATCCGAATCATAAAAATTTAAATGGTTCTGACCATTATGTTCTAGGGTACCAAATGGATAATGAAAATATTT
ATGTGCAAGATCCAGCAGGCTTTCCATTTGTTCCATTATCACTGGACCAATTTAAGAAGGCTTGGATGGCGGAAAGGATT
CCGTATAGGAAAGGAATCAATAAATATTGGTCTACAGCAAAAAAGGTTGTCACATTAGACAATAACGAAATATACGAGAG
AGCAATTGATTATTTTAAGAGAACTTATCGGAAATTCGAAAAAGTGGATATAGGGTTAATTGGAAGGGAAGCAATTTGTT
TTTATGCTGATCAATTATTAAATGCCCCTATTACAGCTGATACTATAAGGCATACAACATTCTTCCTTTTCCAATTAAGT
GCAAGAAGGGCCAACGATTATGCAATGTATTTTAAAGATAGGCATTCACATTTATCAGTGTTGAAGACTGAACAGGCTAA
GGTGTTTGGGATATGTCATTCTATGTCTGTAAATAAAGATTGGAAAGGTATATCGGAGAAGTTAATGAAGCTAGCCGATT
TAGAGGATAATTTTAGATTGGAACTTTTAAAAGTCGGCTATTAA

Upstream 100 bases:

>100_bases
GTTGATAAAAATGATCCAGATGATGAATACGAGAACGGAGCAATTTAATATGGATTTTCAATTTTCAAAATTGTAAGGTT
AACTTATCTACCCGGAGGTG

Downstream 100 bases:

>100_bases
TTATAGAGATTTCCACTTTAACAAACGGGGCGTTTGTTCAATAAAGGTCTCAATACATATTATATATATCAACTATGTAT
GAGCCCTTATTTTAATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLVYIGNGHYCYSNSTAMFLSSIGENVSPQLVEILTGVGLGAMIEYEKNLYFSMRDPDDGINYALNILGFTAEEHQQASD
LDDPFPLLKQQIKQNPVILGPLDMGELTYHPNHKNLNGSDHYVLGYQMDNENIYVQDPAGFPFVPLSLDQFKKAWMAERI
PYRKGINKYWSTAKKVVTLDNNEIYERAIDYFKRTYRKFEKVDIGLIGREAICFYADQLLNAPITADTIRHTTFFLFQLS
ARRANDYAMYFKDRHSHLSVLKTEQAKVFGICHSMSVNKDWKGISEKLMKLADLEDNFRLELLKVGY

Sequences:

>Translated_307_residues
MLVYIGNGHYCYSNSTAMFLSSIGENVSPQLVEILTGVGLGAMIEYEKNLYFSMRDPDDGINYALNILGFTAEEHQQASD
LDDPFPLLKQQIKQNPVILGPLDMGELTYHPNHKNLNGSDHYVLGYQMDNENIYVQDPAGFPFVPLSLDQFKKAWMAERI
PYRKGINKYWSTAKKVVTLDNNEIYERAIDYFKRTYRKFEKVDIGLIGREAICFYADQLLNAPITADTIRHTTFFLFQLS
ARRANDYAMYFKDRHSHLSVLKTEQAKVFGICHSMSVNKDWKGISEKLMKLADLEDNFRLELLKVGY
>Mature_307_residues
MLVYIGNGHYCYSNSTAMFLSSIGENVSPQLVEILTGVGLGAMIEYEKNLYFSMRDPDDGINYALNILGFTAEEHQQASD
LDDPFPLLKQQIKQNPVILGPLDMGELTYHPNHKNLNGSDHYVLGYQMDNENIYVQDPAGFPFVPLSLDQFKKAWMAERI
PYRKGINKYWSTAKKVVTLDNNEIYERAIDYFKRTYRKFEKVDIGLIGREAICFYADQLLNAPITADTIRHTTFFLFQLS
ARRANDYAMYFKDRHSHLSVLKTEQAKVFGICHSMSVNKDWKGISEKLMKLADLEDNFRLELLKVGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOBF_BACSU (O34780)

Other databases:

- EMBL:   AF027868
- EMBL:   AL009126
- PIR:   F69898
- RefSeq:   NP_389770.1
- ProteinModelPortal:   O34780
- SMR:   O34780
- EnsemblBacteria:   EBBACT00000000023
- GeneID:   939609
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18890
- NMPDR:   fig|224308.1.peg.1893
- GenoList:   BSU18890
- HOGENOM:   HBG697547
- OMA:   LGPLDMG
- ProtClustDB:   CLSK887394
- BioCyc:   BSUB:BSU18890-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35349; Mature: 35349

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVYIGNGHYCYSNSTAMFLSSIGENVSPQLVEILTGVGLGAMIEYEKNLYFSMRDPDDG
CEEEEECCEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCEEEEECCCCCC
INYALNILGFTAEEHQQASDLDDPFPLLKQQIKQNPVILGPLDMGELTYHPNHKNLNGSD
HHHEEHEEECCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCCCEEECCCCCCCCCCC
HYVLGYQMDNENIYVQDPAGFPFVPLSLDQFKKAWMAERIPYRKGINKYWSTAKKVVTLD
CEEEEEEECCCEEEEECCCCCCEECCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEC
NNEIYERAIDYFKRTYRKFEKVDIGLIGREAICFYADQLLNAPITADTIRHTTFFLFQLS
CCHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHEEEEEEEE
ARRANDYAMYFKDRHSHLSVLKTEQAKVFGICHSMSVNKDWKGISEKLMKLADLEDNFRL
CCCCCCEEEEEECCCCHHEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEE
ELLKVGY
EEEEECC
>Mature Secondary Structure
MLVYIGNGHYCYSNSTAMFLSSIGENVSPQLVEILTGVGLGAMIEYEKNLYFSMRDPDDG
CEEEEECCEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCEEEEECCCCCC
INYALNILGFTAEEHQQASDLDDPFPLLKQQIKQNPVILGPLDMGELTYHPNHKNLNGSD
HHHEEHEEECCHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCCCEEECCCCCCCCCCC
HYVLGYQMDNENIYVQDPAGFPFVPLSLDQFKKAWMAERIPYRKGINKYWSTAKKVVTLD
CEEEEEEECCCEEEEECCCCCCEECCCHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEC
NNEIYERAIDYFKRTYRKFEKVDIGLIGREAICFYADQLLNAPITADTIRHTTFFLFQLS
CCHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHEEEEEEEE
ARRANDYAMYFKDRHSHLSVLKTEQAKVFGICHSMSVNKDWKGISEKLMKLADLEDNFRL
CCCCCCEEEEEECCCCHHEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEE
ELLKVGY
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377