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The map label for this gene is yobB

Identifier: 16078942

GI number: 16078942

Start: 2050689

End: 2050952

Strand: Direct

Name: yobB

Synonym: BSU18820

Alternate gene names: 16078942

Gene position: 2050689-2050952 (Clockwise)

Preceding gene: 16078940

Following gene: 16078945

Centisome position: 48.65

GC content: 37.88

Gene sequence:

>264_bases
TTGAAGATTAGGAAAATCTTATTGAGTTCTGCTTTATCCTTTGGCATGCTAATATCCGCGGTTCCCGCATTGGCTGCTGG
CACTTCGTCTGAGGTTGCAGTAAAAAATGAAGAATATGATTATGACACTATATACCGCATTAGTCCTCTGCCAATGGACT
TCCAGCCAACAATAGAATACAACGGTTATACTTATACGCTTACACGTCATTATTTTGATTACTCAATCGGGTTTTACACG
GCTATTTATACAAAAGTTGTTTAA

Upstream 100 bases:

>100_bases
AATCGAGATTTTTACTTTTTTTATGATCCATTATTCACTTCCAAAATAACTTCCAATTACAACATAATATATGTATAAAT
TGTAAATGGAGTTGATGTAA

Downstream 100 bases:

>100_bases
ACTTATAAAGGAGCTTTTTAGCTCCTTTTTCTCTTGTTTTAAGCAAGGTATTTCTTTCTATGTGGTCCCCTATCAAATAC
AACATCAACATTCTCCAGTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKIRKILLSSALSFGMLISAVPALAAGTSSEVAVKNEEYDYDTIYRISPLPMDFQPTIEYNGYTYTLTRHYFDYSIGFYT
AIYTKVV

Sequences:

>Translated_87_residues
MKIRKILLSSALSFGMLISAVPALAAGTSSEVAVKNEEYDYDTIYRISPLPMDFQPTIEYNGYTYTLTRHYFDYSIGFYT
AIYTKVV
>Mature_87_residues
MKIRKILLSSALSFGMLISAVPALAAGTSSEVAVKNEEYDYDTIYRISPLPMDFQPTIEYNGYTYTLTRHYFDYSIGFYT
AIYTKVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOBB_BACSU (O31836)

Other databases:

- EMBL:   AL009126
- PIR:   C69898
- RefSeq:   NP_389763.1
- EnsemblBacteria:   EBBACT00000001348
- GeneID:   940049
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18820
- NMPDR:   fig|224308.1.peg.1885
- GenoList:   BSU18820
- GeneTree:   EBGT00050000006679
- ProtClustDB:   CLSK2518237
- BioCyc:   BSUB:BSU18820-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9896; Mature: 9896

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRKILLSSALSFGMLISAVPALAAGTSSEVAVKNEEYDYDTIYRISPLPMDFQPTIEY
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCEEE
NGYTYTLTRHYFDYSIGFYTAIYTKVV
CCEEEEEEEEEEECCHHHHHHHHEECC
>Mature Secondary Structure
MKIRKILLSSALSFGMLISAVPALAAGTSSEVAVKNEEYDYDTIYRISPLPMDFQPTIEY
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCEEE
NGYTYTLTRHYFDYSIGFYTAIYTKVV
CCEEEEEEEEEEECCHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377