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The map label for this gene is yngJ

Identifier: 16078887

GI number: 16078887

Start: 1956218

End: 1957360

Strand: Reverse

Name: yngJ

Synonym: BSU18260

Alternate gene names: 16078887

Gene position: 1957360-1956218 (Counterclockwise)

Preceding gene: 16078888

Following gene: 16078886

Centisome position: 46.43

GC content: 47.68

Gene sequence:

>1143_bases
GTGAATTTTGAGCTGACAAAAGAACAACAAATGGTGCGTGAAATGGTAAAAGATTTTGCGAAAAAAGAAATTGCTCCTCA
CGCTGAACATGTAGATCAAACAGGCGAGTTCCCGATGCAAACATTTAAAAAAATGGGTGAACTCGGTCTGATGGGTATTC
CATTTCCAGAAGAATACGGCGGATCTGGCGGTGATACGATTTCATATGCCTTAGCGGTTGAAGAAGTCGGCAAAGCCTGC
GGCAGTACTGGATTAAGCTATGCTGCAGCGGTCTCGCTAGGCGCAAGCCCTCTTTACTACTTCGGAACAGAAGAGCAAAA
ACAGACGCATTTGACGCCGCTGGCTTCAGGCACAGCACTCGGATCATTCGGCCTGACGGAGCCAAATGCCGGCTCAGATG
CAGGAGGCACTCAAACAAAAGCGATTTCAAATGGTGACGAGTATGTAATCAACGGCGAAAAGTGCTGGATCACTAATGCA
AGCTACGCACGCACAGTTATTGTAACCGCCGTAACAGGCAAAAACAAAGACGGAAAAAACATCATCTCCGCATTAATCGT
GCCAACTGACACACCAGGACTTACGATTACGAGCCCGTACGATAAAATGGGCGTCCGCGGTTCGAATACAGCGGAAATCT
TGCTTGAAGATGTAAGAGTGCCTGCGGCCAACTTACTTGGCGATCCAACAAAAGGGTTTAAACAGTTTCTATATACGCTG
GATGGTGGTCGAATCTCCATCGCTGCTCTTGCAGTCGGCATTGCCCAAGCGGCCCTTGACGCATCATTGGCATATGCGAA
AGAGCGAAAGCAGTTTGGACAGCCGATTTCTTCCTTTCAAGCGATTCAATTTAAGCTTGCTGACATGGCGATGGAAATTG
ATCTGGCACGGCAAATGGTGTTAAAAGCCGCCTGGCTGAAAGATCATAACCGCCCGTTCACCAAAGAAGCGGCGTACGCC
AAGCTATTCGCATCTGAAATGGCGACAAGAGCTTGCAATCAAGCCATTCAAATCCATGGAGGTTCAGGCTATATGAAAGA
GTATGGGGTGGAACGGATGCTGCGGGACGCAAAATTAATGGAAATCGGTGAAGGCACATCTGAAATTCAGCGTCTCGTGA
TCGCCAGACAGCTTTTAAAATAA

Upstream 100 bases:

>100_bases
TAAAAAATGATTCAGTTTTAATTTTCAGACTTTTCTTGTCAGGGAATGATTATAGAACTCGCCTAATAGGATGTTACAAA
GATGTGAAGGAGGAAACGAT

Downstream 100 bases:

>100_bases
AAATGTAAACGCTTTCCTATCATTAAGAAAGGAGGAACAATGAATGGCTGAACTCATCCATTCCACAATCGGCAGGCTGC
TGGAACAAACAGCTGATGCG

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MNFELTKEQQMVREMVKDFAKKEIAPHAEHVDQTGEFPMQTFKKMGELGLMGIPFPEEYGGSGGDTISYALAVEEVGKAC
GSTGLSYAAAVSLGASPLYYFGTEEQKQTHLTPLASGTALGSFGLTEPNAGSDAGGTQTKAISNGDEYVINGEKCWITNA
SYARTVIVTAVTGKNKDGKNIISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVPAANLLGDPTKGFKQFLYTL
DGGRISIAALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEIDLARQMVLKAAWLKDHNRPFTKEAAYA
KLFASEMATRACNQAIQIHGGSGYMKEYGVERMLRDAKLMEIGEGTSEIQRLVIARQLLK

Sequences:

>Translated_380_residues
MNFELTKEQQMVREMVKDFAKKEIAPHAEHVDQTGEFPMQTFKKMGELGLMGIPFPEEYGGSGGDTISYALAVEEVGKAC
GSTGLSYAAAVSLGASPLYYFGTEEQKQTHLTPLASGTALGSFGLTEPNAGSDAGGTQTKAISNGDEYVINGEKCWITNA
SYARTVIVTAVTGKNKDGKNIISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVPAANLLGDPTKGFKQFLYTL
DGGRISIAALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEIDLARQMVLKAAWLKDHNRPFTKEAAYA
KLFASEMATRACNQAIQIHGGSGYMKEYGVERMLRDAKLMEIGEGTSEIQRLVIARQLLK
>Mature_380_residues
MNFELTKEQQMVREMVKDFAKKEIAPHAEHVDQTGEFPMQTFKKMGELGLMGIPFPEEYGGSGGDTISYALAVEEVGKAC
GSTGLSYAAAVSLGASPLYYFGTEEQKQTHLTPLASGTALGSFGLTEPNAGSDAGGTQTKAISNGDEYVINGEKCWITNA
SYARTVIVTAVTGKNKDGKNIISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVPAANLLGDPTKGFKQFLYTL
DGGRISIAALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEIDLARQMVLKAAWLKDHNRPFTKEAAYA
KLFASEMATRACNQAIQIHGGSGYMKEYGVERMLRDAKLMEIGEGTSEIQRLVIARQLLK

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family

Homologues:

Organism=Homo sapiens, GI4557233, Length=379, Percent_Identity=50.3957783641161, Blast_Score=371, Evalue=1e-103,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=40, Blast_Score=280, Evalue=2e-75,
Organism=Homo sapiens, GI4557231, Length=380, Percent_Identity=41.3157894736842, Blast_Score=276, Evalue=3e-74,
Organism=Homo sapiens, GI187960098, Length=380, Percent_Identity=41.3157894736842, Blast_Score=276, Evalue=3e-74,
Organism=Homo sapiens, GI4501859, Length=377, Percent_Identity=39.2572944297082, Blast_Score=262, Evalue=5e-70,
Organism=Homo sapiens, GI226958414, Length=346, Percent_Identity=41.0404624277457, Blast_Score=257, Evalue=2e-68,
Organism=Homo sapiens, GI7656849, Length=377, Percent_Identity=36.3395225464191, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI21361497, Length=367, Percent_Identity=38.4196185286104, Blast_Score=236, Evalue=4e-62,
Organism=Homo sapiens, GI76496475, Length=391, Percent_Identity=37.0843989769821, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI4501857, Length=377, Percent_Identity=32.8912466843501, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI4557235, Length=391, Percent_Identity=37.0843989769821, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI4503943, Length=377, Percent_Identity=31.2997347480106, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI7669494, Length=353, Percent_Identity=32.5779036827195, Blast_Score=168, Evalue=7e-42,
Organism=Homo sapiens, GI48976061, Length=333, Percent_Identity=31.5315315315315, Blast_Score=145, Evalue=9e-35,
Organism=Homo sapiens, GI211971008, Length=333, Percent_Identity=31.5315315315315, Blast_Score=144, Evalue=1e-34,
Organism=Homo sapiens, GI38505218, Length=402, Percent_Identity=29.1044776119403, Blast_Score=135, Evalue=7e-32,
Organism=Escherichia coli, GI87081958, Length=386, Percent_Identity=35.2331606217617, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1786223, Length=384, Percent_Identity=28.3854166666667, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI87081702, Length=336, Percent_Identity=25.297619047619, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI87082384, Length=327, Percent_Identity=24.7706422018349, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17534899, Length=384, Percent_Identity=43.2291666666667, Blast_Score=294, Evalue=5e-80,
Organism=Caenorhabditis elegans, GI17569725, Length=382, Percent_Identity=42.6701570680628, Blast_Score=292, Evalue=2e-79,
Organism=Caenorhabditis elegans, GI17570075, Length=383, Percent_Identity=42.5587467362924, Blast_Score=286, Evalue=1e-77,
Organism=Caenorhabditis elegans, GI17538396, Length=380, Percent_Identity=39.2105263157895, Blast_Score=275, Evalue=3e-74,
Organism=Caenorhabditis elegans, GI17508101, Length=373, Percent_Identity=37.5335120643432, Blast_Score=252, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI17506239, Length=372, Percent_Identity=37.3655913978495, Blast_Score=246, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI17533517, Length=376, Percent_Identity=35.9042553191489, Blast_Score=227, Evalue=9e-60,
Organism=Caenorhabditis elegans, GI71985184, Length=381, Percent_Identity=35.4330708661417, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI71990804, Length=308, Percent_Identity=39.2857142857143, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17551932, Length=359, Percent_Identity=30.6406685236769, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17534353, Length=377, Percent_Identity=30.7692307692308, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI17505929, Length=359, Percent_Identity=31.1977715877437, Blast_Score=197, Evalue=8e-51,
Organism=Caenorhabditis elegans, GI32563615, Length=232, Percent_Identity=37.9310344827586, Blast_Score=158, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI71982178, Length=276, Percent_Identity=34.4202898550725, Blast_Score=157, Evalue=6e-39,
Organism=Caenorhabditis elegans, GI71985192, Length=328, Percent_Identity=32.9268292682927, Blast_Score=154, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI17562446, Length=337, Percent_Identity=30.8605341246291, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17531909, Length=239, Percent_Identity=33.4728033472803, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17531913, Length=176, Percent_Identity=34.0909090909091, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI86563381, Length=273, Percent_Identity=26.7399267399267, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI86563383, Length=273, Percent_Identity=26.7399267399267, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=47.3404255319149, Blast_Score=355, Evalue=2e-98,
Organism=Drosophila melanogaster, GI24646207, Length=381, Percent_Identity=44.0944881889764, Blast_Score=313, Evalue=2e-85,
Organism=Drosophila melanogaster, GI24660351, Length=382, Percent_Identity=42.4083769633508, Blast_Score=281, Evalue=6e-76,
Organism=Drosophila melanogaster, GI21355753, Length=379, Percent_Identity=41.4248021108179, Blast_Score=275, Evalue=3e-74,
Organism=Drosophila melanogaster, GI24666513, Length=376, Percent_Identity=40.4255319148936, Blast_Score=260, Evalue=1e-69,
Organism=Drosophila melanogaster, GI281363737, Length=381, Percent_Identity=35.1706036745407, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI19920834, Length=384, Percent_Identity=32.03125, Blast_Score=185, Evalue=5e-47,
Organism=Drosophila melanogaster, GI221473076, Length=321, Percent_Identity=25.2336448598131, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI45550141, Length=321, Percent_Identity=25.2336448598131, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACDC_BACSU (O34421)

Other databases:

- EMBL:   Y13917
- EMBL:   AL009126
- PIR:   G69893
- RefSeq:   NP_389708.1
- HSSP:   Q06319
- ProteinModelPortal:   O34421
- SMR:   O34421
- EnsemblBacteria:   EBBACT00000000688
- GeneID:   939996
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU18260
- NMPDR:   fig|224308.1.peg.1830
- GenoList:   BSU18260
- GeneTree:   EBGT00070000031843
- HOGENOM:   HBG699365
- OMA:   NYDKMGV
- PhylomeDB:   O34421
- ProtClustDB:   CLSK872936
- BioCyc:   BSUB:BSU18260-MONOMER
- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100
- Gene3D:   G3DSA:2.40.110.10
- Gene3D:   G3DSA:1.10.540.10
- Gene3D:   G3DSA:1.20.140.10

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N; SSF56645 AcylCoA_dehyd_NM; SSF47203 AcylCoADH_C_like

EC number: NA

Molecular weight: Translated: 40919; Mature: 40919

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS00072 ACYL_COA_DH_1; PS00073 ACYL_COA_DH_2

Important sites: ACT_SITE 364-364 BINDING 269-269

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFELTKEQQMVREMVKDFAKKEIAPHAEHVDQTGEFPMQTFKKMGELGLMGIPFPEEYG
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHC
GSGGDTISYALAVEEVGKACGSTGLSYAAAVSLGASPLYYFGTEEQKQTHLTPLASGTAL
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCCCC
GSFGLTEPNAGSDAGGTQTKAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKN
CCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCEEEEECCCCCEEEEEEEEECCCCCHHH
IISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVPAANLLGDPTKGFKQFLYTL
HHHEEEEECCCCCEEEECCHHHHCCCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHC
DGGRISIAALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEIDLARQMV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LKAAWLKDHNRPFTKEAAYAKLFASEMATRACNQAIQIHGGSGYMKEYGVERMLRDAKLM
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHH
EIGEGTSEIQRLVIARQLLK
HHCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNFELTKEQQMVREMVKDFAKKEIAPHAEHVDQTGEFPMQTFKKMGELGLMGIPFPEEYG
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHC
GSGGDTISYALAVEEVGKACGSTGLSYAAAVSLGASPLYYFGTEEQKQTHLTPLASGTAL
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCCCC
GSFGLTEPNAGSDAGGTQTKAISNGDEYVINGEKCWITNASYARTVIVTAVTGKNKDGKN
CCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCEEEEECCCCCEEEEEEEEECCCCCHHH
IISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVPAANLLGDPTKGFKQFLYTL
HHHEEEEECCCCCEEEECCHHHHCCCCCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHC
DGGRISIAALAVGIAQAALDASLAYAKERKQFGQPISSFQAIQFKLADMAMEIDLARQMV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LKAAWLKDHNRPFTKEAAYAKLFASEMATRACNQAIQIHGGSGYMKEYGVERMLRDAKLM
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHH
EIGEGTSEIQRLVIARQLLK
HHCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377