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The map label for this gene is yndJ

Identifier: 16078843

GI number: 16078843

Start: 1912953

End: 1914593

Strand: Direct

Name: yndJ

Synonym: BSU17800

Alternate gene names: 16078843

Gene position: 1912953-1914593 (Clockwise)

Preceding gene: 16078842

Following gene: 16078844

Centisome position: 45.38

GC content: 41.8

Gene sequence:

>1641_bases
ATGAAACGAAATGGCATAGTCAGTGCGCTTTGTTTTATTGGATTTCTTGCAGCAGAAGCACCGGATATTTCAGTGGCAGA
GGCACTCGTTTTGTTATCCATTCTATTTTTCGTGCCGGGAATTTTTCCTTTTGTTTTTCGTCAATCTCCGGTTCGTGCTG
CTCAGTTTATGGAAAACGGGCTAATCCAGTGCTATCCTGTAGCCGCATTCTTTGCGGTGCTGGCTCTAGTGACGGAGGTT
GGGGGTTTCGCACTTATCTGGTGGATGTACACAGTTTTTAATGCATTGTATGCGATCCTCCGCCTTTGGGAAACAAAGAT
ACATAGAATCGAAGAGACATCAGTTTTGTTCGGTCTTATTTATTTGGCGGGAGGAGGATTTTGGTTTTTTGCTTATGCTG
CCCATTTGCAGATCATGCAATTTGGCCCTCTCATCATTTTGCTGACTGCTGTCCACTTTCACTATTCTGCTTTTCTGATC
CCGATCTTCAACGGTTTACTCGGCAGAACCATTAGAAAACATCGGATGTTGTACAGTTGGATAACATGGGTGATTTTGCT
TTCGCCCCTTCTTATCGCACTGGGCATCACATATTCAAAAACACTTGATGTCATTGCGGTTAGCATTTATATGGCGGCGA
TTTATCTTCATGCATTTTTGGTGTTCACGGCAGCTTTTCGCACCAAGACGGGGACATTTCTTATTCGGCTTTCTTCCGCT
GTTTTAATGATAACGATTGCTTTCTCGATGATTTATTCATTTGGTGTCTTTCGGCAAGAAGTTACATTGACCATCAATCA
GATGATTTGGATTCACGGTTTTGTCAACGCGTTTGGTGTTATCTTGCCCGCTCTCATAGGGTGGAGAATAGAGGATGCGA
AACCTTTTGATGCAGACAGTGTAAAGACATTCAGCCGTATCTACGGAAAAAGAAAGATTGGAGAAGAATTTTTAGCTAAC
ATTCAAGCTGAAAATAACGCTCGGTACAGCGGACTTGTGGATGATATGGGCAGCCTGCGTTCAAAAGATTTTTCACCAGA
AAAACTGGCGCCGCTCATTCTTTCGTTTTATGAACAAACCATCGAATACAATATTAAAGCAAAAGTAACATGGAGCACGT
GGTTTCGGCCGCTTGCAATTATTTACGAATGGTTCAGCAGAAGAATCGGCCAAATACATCTTTCGACGAACCCTGACTGG
TATAGGATGTACAGCAAGATAAAAGGTGTTCATTCGAAAAAAGACGGAAGGGAAAGAGTACGTGCCTGGATTAGAACAAA
TGAAAAAAACGAAACCATTTTTACCGCTCTTTATTCAGTGTATCGTTCAAATGGAGAGGGGTATATGAATATTTCTTTAC
CGCTTCCATTCAGCAGCATGACAGGTATTTTAAAACCATATCATCATCAGGAGAAGCTGGTTTTAACAAGCAGGCGGAGA
AAAAGCAGAGCGGGGGATGAGGGGATTTATCTGCAAACAAGAGCGGGAACTTGTCCGCTTCCTTTATCTGAAACCTTTCT
GATAGAAGCTGTACATGACAACAAATTAACCGCTGTTCATCATATGTGGCTGTTTGGAATAAAATTTCTAACTGTTCATT
ACAGCATTACACATATTAACCAGCCTATTGAAAGAACCTAA

Upstream 100 bases:

>100_bases
AAAAAAAGAATTGTTTCACCATTGAAGTGCATGTGCAAAATACAATTCTTGGCACTCTTTTCTTTTATAAGGGAACGTTT
CAGGAGGAAGAGAGAGAATC

Downstream 100 bases:

>100_bases
CACAAAGAAGAAGCTTCGTCTGCCAGTTGTAATGAGATGAACTGTTTTAAAATTCTGCACCGCATCAAGACAGGAAAGGA
AGGGTTTATGGTGTTTTATA

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MKRNGIVSALCFIGFLAAEAPDISVAEALVLLSILFFVPGIFPFVFRQSPVRAAQFMENGLIQCYPVAAFFAVLALVTEV
GGFALIWWMYTVFNALYAILRLWETKIHRIEETSVLFGLIYLAGGGFWFFAYAAHLQIMQFGPLIILLTAVHFHYSAFLI
PIFNGLLGRTIRKHRMLYSWITWVILLSPLLIALGITYSKTLDVIAVSIYMAAIYLHAFLVFTAAFRTKTGTFLIRLSSA
VLMITIAFSMIYSFGVFRQEVTLTINQMIWIHGFVNAFGVILPALIGWRIEDAKPFDADSVKTFSRIYGKRKIGEEFLAN
IQAENNARYSGLVDDMGSLRSKDFSPEKLAPLILSFYEQTIEYNIKAKVTWSTWFRPLAIIYEWFSRRIGQIHLSTNPDW
YRMYSKIKGVHSKKDGRERVRAWIRTNEKNETIFTALYSVYRSNGEGYMNISLPLPFSSMTGILKPYHHQEKLVLTSRRR
KSRAGDEGIYLQTRAGTCPLPLSETFLIEAVHDNKLTAVHHMWLFGIKFLTVHYSITHINQPIERT

Sequences:

>Translated_546_residues
MKRNGIVSALCFIGFLAAEAPDISVAEALVLLSILFFVPGIFPFVFRQSPVRAAQFMENGLIQCYPVAAFFAVLALVTEV
GGFALIWWMYTVFNALYAILRLWETKIHRIEETSVLFGLIYLAGGGFWFFAYAAHLQIMQFGPLIILLTAVHFHYSAFLI
PIFNGLLGRTIRKHRMLYSWITWVILLSPLLIALGITYSKTLDVIAVSIYMAAIYLHAFLVFTAAFRTKTGTFLIRLSSA
VLMITIAFSMIYSFGVFRQEVTLTINQMIWIHGFVNAFGVILPALIGWRIEDAKPFDADSVKTFSRIYGKRKIGEEFLAN
IQAENNARYSGLVDDMGSLRSKDFSPEKLAPLILSFYEQTIEYNIKAKVTWSTWFRPLAIIYEWFSRRIGQIHLSTNPDW
YRMYSKIKGVHSKKDGRERVRAWIRTNEKNETIFTALYSVYRSNGEGYMNISLPLPFSSMTGILKPYHHQEKLVLTSRRR
KSRAGDEGIYLQTRAGTCPLPLSETFLIEAVHDNKLTAVHHMWLFGIKFLTVHYSITHINQPIERT
>Mature_546_residues
MKRNGIVSALCFIGFLAAEAPDISVAEALVLLSILFFVPGIFPFVFRQSPVRAAQFMENGLIQCYPVAAFFAVLALVTEV
GGFALIWWMYTVFNALYAILRLWETKIHRIEETSVLFGLIYLAGGGFWFFAYAAHLQIMQFGPLIILLTAVHFHYSAFLI
PIFNGLLGRTIRKHRMLYSWITWVILLSPLLIALGITYSKTLDVIAVSIYMAAIYLHAFLVFTAAFRTKTGTFLIRLSSA
VLMITIAFSMIYSFGVFRQEVTLTINQMIWIHGFVNAFGVILPALIGWRIEDAKPFDADSVKTFSRIYGKRKIGEEFLAN
IQAENNARYSGLVDDMGSLRSKDFSPEKLAPLILSFYEQTIEYNIKAKVTWSTWFRPLAIIYEWFSRRIGQIHLSTNPDW
YRMYSKIKGVHSKKDGRERVRAWIRTNEKNETIFTALYSVYRSNGEGYMNISLPLPFSSMTGILKPYHHQEKLVLTSRRR
KSRAGDEGIYLQTRAGTCPLPLSETFLIEAVHDNKLTAVHHMWLFGIKFLTVHYSITHINQPIERT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNDJ_BACSU (O31813)

Other databases:

- EMBL:   AL009126
- PIR:   A69890
- RefSeq:   NP_389663.1
- ProteinModelPortal:   O31813
- EnsemblBacteria:   EBBACT00000001451
- GeneID:   939575
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU17800
- NMPDR:   fig|224308.1.peg.1784
- GenoList:   BSU17800
- GeneTree:   EBGT00050000002442
- HOGENOM:   HBG338046
- OMA:   HFHYSAF
- ProtClustDB:   CLSK887347
- BioCyc:   BSUB:BSU17800-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62472; Mature: 62472

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd9b0fd8)-; HASH(0xf6a74ec)-; HASH(0xe63ddb8)-; HASH(0xd39de8c)-; HASH(0xebcc48c)-; HASH(0xf1bf5bc)-; HASH(0xbffbcdc)-; HASH(0xf69adf8)-; HASH(0xe84df5c)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNGIVSALCFIGFLAAEAPDISVAEALVLLSILFFVPGIFPFVFRQSPVRAAQFMENG
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
LIQCYPVAAFFAVLALVTEVGGFALIWWMYTVFNALYAILRLWETKIHRIEETSVLFGLI
CEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLAGGGFWFFAYAAHLQIMQFGPLIILLTAVHFHYSAFLIPIFNGLLGRTIRKHRMLYSW
HHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITWVILLSPLLIALGITYSKTLDVIAVSIYMAAIYLHAFLVFTAAFRTKTGTFLIRLSSA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHH
VLMITIAFSMIYSFGVFRQEVTLTINQMIWIHGFVNAFGVILPALIGWRIEDAKPFDADS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
VKTFSRIYGKRKIGEEFLANIQAENNARYSGLVDDMGSLRSKDFSPEKLAPLILSFYEQT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IEYNIKAKVTWSTWFRPLAIIYEWFSRRIGQIHLSTNPDWYRMYSKIKGVHSKKDGRERV
HHEEEEEEEEHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCCCCCHHHHH
RAWIRTNEKNETIFTALYSVYRSNGEGYMNISLPLPFSSMTGILKPYHHQEKLVLTSRRR
HHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHH
KSRAGDEGIYLQTRAGTCPLPLSETFLIEAVHDNKLTAVHHMWLFGIKFLTVHYSITHIN
HCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEEHHHCC
QPIERT
CCCCCH
>Mature Secondary Structure
MKRNGIVSALCFIGFLAAEAPDISVAEALVLLSILFFVPGIFPFVFRQSPVRAAQFMENG
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
LIQCYPVAAFFAVLALVTEVGGFALIWWMYTVFNALYAILRLWETKIHRIEETSVLFGLI
CEEEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLAGGGFWFFAYAAHLQIMQFGPLIILLTAVHFHYSAFLIPIFNGLLGRTIRKHRMLYSW
HHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITWVILLSPLLIALGITYSKTLDVIAVSIYMAAIYLHAFLVFTAAFRTKTGTFLIRLSSA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHH
VLMITIAFSMIYSFGVFRQEVTLTINQMIWIHGFVNAFGVILPALIGWRIEDAKPFDADS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
VKTFSRIYGKRKIGEEFLANIQAENNARYSGLVDDMGSLRSKDFSPEKLAPLILSFYEQT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IEYNIKAKVTWSTWFRPLAIIYEWFSRRIGQIHLSTNPDWYRMYSKIKGVHSKKDGRERV
HHEEEEEEEEHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCCCCCHHHHH
RAWIRTNEKNETIFTALYSVYRSNGEGYMNISLPLPFSSMTGILKPYHHQEKLVLTSRRR
HHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHH
KSRAGDEGIYLQTRAGTCPLPLSETFLIEAVHDNKLTAVHHMWLFGIKFLTVHYSITHIN
HCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHEEEHHHCC
QPIERT
CCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377