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The map label for this gene is yncM

Identifier: 16078832

GI number: 16078832

Start: 1903511

End: 1904263

Strand: Reverse

Name: yncM

Synonym: BSU17690

Alternate gene names: 16078832

Gene position: 1904263-1903511 (Counterclockwise)

Preceding gene: 255767420

Following gene: 16078830

Centisome position: 45.17

GC content: 45.29

Gene sequence:

>753_bases
ATGGCGAAACCACTATCAAAAGGGGGAATTTTGGTGAAAAAAGTATTGATTGCAGGTGCAGTAGGAACAGCAGTTCTTTT
CGGAACCCTTTCATCAGGTATACCAGGTTTACCCGCGGCAGACGCTCAAGTCGCAAAAGCAGCATCCGAGCTGCCTAACG
GAATCGGCGGCCGTGTCTACCTGAACAGTACGGGCGCCGTTTTTACAGCTAAAATCGTGCTTCCTGAAACTGTCAAAAAC
AACGACTCGGTCTCTACTCCCTATATTTATTCTGGCTTTAGGGCAACAAGCGGAACTGAAGCCGATATCGGGCTTCAGTA
CAGCAAACAATACAACGTCTGGAAGCCCCTCATGAAGGTTGGGTCCAAAAATGAAGAAACGTACATCGAAGGAAAAGACA
AATTCACATACAATAAAGGCTTCCGCCCTGGAAGCACAGTCCAAATGACAATCTATAAAAATTTAAGCGGCAATACGCGC
ATGACCCTTTGGGGAACGAACAATGACGGCTACACCGGACGGATTATCACAGAAATTCAAGGAACCAACATCGGCACGAT
TTCAAAATGGAAAACACTTGCTACCGCGGCTGTTTCGTATGAAAGCCAGCGTGATGCGATCAAAGCAACCTTTTCGACCT
CTTTTAACAACATCACTATCGACAATAAAGCCGTCACTCCTGTGGTAGATACACAGGATTTCGCAAAGGTTTCAGTTGCA
GGAAATAACGTTACGATCTCTGTTAATAAATAA

Upstream 100 bases:

>100_bases
AGCTTTCAGATTGGCGAAGCGTTTCGACCTTACATCATTCAAAATGAAATATTTTGTCGATTTATATACGTAAATCCAGT
TCCAAAATAAGGTATAATAA

Downstream 100 bases:

>100_bases
ACGAAGCAGCAAAAAGCCGCCAGCATTGTCTGGCGGTTTTCCTTGGAGCATACTGGTCATAGTTCGTTTCTTCAGCTCTT
TTGTTTAAACCTAACTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MAKPLSKGGILVKKVLIAGAVGTAVLFGTLSSGIPGLPAADAQVAKAASELPNGIGGRVYLNSTGAVFTAKIVLPETVKN
NDSVSTPYIYSGFRATSGTEADIGLQYSKQYNVWKPLMKVGSKNEETYIEGKDKFTYNKGFRPGSTVQMTIYKNLSGNTR
MTLWGTNNDGYTGRIITEIQGTNIGTISKWKTLATAAVSYESQRDAIKATFSTSFNNITIDNKAVTPVVDTQDFAKVSVA
GNNVTISVNK

Sequences:

>Translated_250_residues
MAKPLSKGGILVKKVLIAGAVGTAVLFGTLSSGIPGLPAADAQVAKAASELPNGIGGRVYLNSTGAVFTAKIVLPETVKN
NDSVSTPYIYSGFRATSGTEADIGLQYSKQYNVWKPLMKVGSKNEETYIEGKDKFTYNKGFRPGSTVQMTIYKNLSGNTR
MTLWGTNNDGYTGRIITEIQGTNIGTISKWKTLATAAVSYESQRDAIKATFSTSFNNITIDNKAVTPVVDTQDFAKVSVA
GNNVTISVNK
>Mature_249_residues
AKPLSKGGILVKKVLIAGAVGTAVLFGTLSSGIPGLPAADAQVAKAASELPNGIGGRVYLNSTGAVFTAKIVLPETVKNN
DSVSTPYIYSGFRATSGTEADIGLQYSKQYNVWKPLMKVGSKNEETYIEGKDKFTYNKGFRPGSTVQMTIYKNLSGNTRM
TLWGTNNDGYTGRIITEIQGTNIGTISKWKTLATAAVSYESQRDAIKATFSTSFNNITIDNKAVTPVVDTQDFAKVSVAG
NNVTISVNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yrpD

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNCM_BACSU (O31803)

Other databases:

- EMBL:   AL009126
- PIR:   A69889
- RefSeq:   NP_389652.1
- ProteinModelPortal:   O31803
- EnsemblBacteria:   EBBACT00000003247
- GeneID:   939576
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU17690
- NMPDR:   fig|224308.1.peg.1773
- GenoList:   BSU17690
- GeneTree:   EBGT00050000002248
- HOGENOM:   HBG338686
- ProtClustDB:   CLSK887344
- BioCyc:   BSUB:BSU17690-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26597; Mature: 26466

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKPLSKGGILVKKVLIAGAVGTAVLFGTLSSGIPGLPAADAQVAKAASELPNGIGGRVY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEE
LNSTGAVFTAKIVLPETVKNNDSVSTPYIYSGFRATSGTEADIGLQYSKQYNVWKPLMKV
ECCCCCEEEEEEEECCCCCCCCCCCCCEEEECEECCCCCCCCCCEEECCCCCHHHHHHHH
GSKNEETYIEGKDKFTYNKGFRPGSTVQMTIYKNLSGNTRMTLWGTNNDGYTGRIITEIQ
CCCCCCEEEECCCCEEECCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEEC
GTNIGTISKWKTLATAAVSYESQRDAIKATFSTSFNNITIDNKAVTPVVDTQDFAKVSVA
CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCEECCEECCCCCEEEEEE
GNNVTISVNK
CCEEEEEEEC
>Mature Secondary Structure 
AKPLSKGGILVKKVLIAGAVGTAVLFGTLSSGIPGLPAADAQVAKAASELPNGIGGRVY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCEEE
LNSTGAVFTAKIVLPETVKNNDSVSTPYIYSGFRATSGTEADIGLQYSKQYNVWKPLMKV
ECCCCCEEEEEEEECCCCCCCCCCCCCEEEECEECCCCCCCCCCEEECCCCCHHHHHHHH
GSKNEETYIEGKDKFTYNKGFRPGSTVQMTIYKNLSGNTRMTLWGTNNDGYTGRIITEIQ
CCCCCCEEEECCCCEEECCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCEEEEEEEEEC
GTNIGTISKWKTLATAAVSYESQRDAIKATFSTSFNNITIDNKAVTPVVDTQDFAKVSVA
CCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCEECCEECCCCCEEEEEE
GNNVTISVNK
CCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10658653