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The map label for this gene is flgD

Identifier: 16078691

GI number: 16078691

Start: 1699738

End: 1700160

Strand: Direct

Name: flgD

Synonym: BSU16280

Alternate gene names: 16078691

Gene position: 1699738-1700160 (Clockwise)

Preceding gene: 255767368

Following gene: 255767369

Centisome position: 40.32

GC content: 37.59

Gene sequence:

>423_bases
ATGACTTCTATAAGTTCAGAATATAAACTGCCTGAAAAAACGAACACTGTGTCGACGAACAACAGCAGCTTGGGGAAAGA
CGAGTTTTTAAAAATATTAATGACTCAAGTTCAAAACCAAGATCCGCTTAACCCGATTGACGATAAAGAATTTATCAGCC
AGATGGCGACTTTTTCAAGCTTGGAGCAAATGATGAATCTGAATACGACAATGACTCAATTCGTTGAAAACCAAGATCCG
TTTACAACGTATGTTGATTGGATGGGAAAAGAAGTATCTTGGACTGATGGTAAAAGTGCAACAGATAAAACAGGCACAGT
AAGCTCTGTTAAACATTTTAAAGGAAATTATTATCTCGTTCTTGATGATGGGACCGAGATCAGTCCTGCGAATGTCATGT
CTGTGGGACAATCATCTAAATAA

Upstream 100 bases:

>100_bases
AGCAGCAAGAGGGGCAGAGACAGCAAAGACAGAAAAAGCAATCAAATGATTTTGGCGATCTGCTCGATGAAGTGTCGATG
GTTGAAATGGAGGAAGAAGA

Downstream 100 bases:

>100_bases
AAACATCTGGGGGAATATATTATGTTACGTTCACTTTATTCTGGAATCAGCGGTATGAAAAACTTTCAAACAAAGCTTGA
CGTAATCGGTAACAACATTG

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: ORF 8

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTSISSEYKLPEKTNTVSTNNSSLGKDEFLKILMTQVQNQDPLNPIDDKEFISQMATFSSLEQMMNLNTTMTQFVENQDP
FTTYVDWMGKEVSWTDGKSATDKTGTVSSVKHFKGNYYLVLDDGTEISPANVMSVGQSSK

Sequences:

>Translated_140_residues
MTSISSEYKLPEKTNTVSTNNSSLGKDEFLKILMTQVQNQDPLNPIDDKEFISQMATFSSLEQMMNLNTTMTQFVENQDP
FTTYVDWMGKEVSWTDGKSATDKTGTVSSVKHFKGNYYLVLDDGTEISPANVMSVGQSSK
>Mature_139_residues
TSISSEYKLPEKTNTVSTNNSSLGKDEFLKILMTQVQNQDPLNPIDDKEFISQMATFSSLEQMMNLNTTMTQFVENQDPF
TTYVDWMGKEVSWTDGKSATDKTGTVSSVKHFKGNYYLVLDDGTEISPANVMSVGQSSK

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): YLXG_BACSU (P23455)

Other databases:

- EMBL:   X56049
- EMBL:   AL009126
- PIR:   H42365
- RefSeq:   NP_389510.1
- ProteinModelPortal:   P23455
- EnsemblBacteria:   EBBACT00000002599
- GeneID:   936501
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU16280
- NMPDR:   fig|224308.1.peg.1630
- GenoList:   BSU16280
- GeneTree:   EBGT00050000001876
- HOGENOM:   HBG532772
- OMA:   FISQMAT
- ProtClustDB:   PRK09618
- BioCyc:   BSUB:BSU16280-MONOMER
- InterPro:   IPR005648

Pfam domain/function: PF03963 FlgD

EC number: NA

Molecular weight: Translated: 15645; Mature: 15513

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSISSEYKLPEKTNTVSTNNSSLGKDEFLKILMTQVQNQDPLNPIDDKEFISQMATFSS
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LEQMMNLNTTMTQFVENQDPFTTYVDWMGKEVSWTDGKSATDKTGTVSSVKHFKGNYYLV
HHHHHCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEE
LDDGTEISPANVMSVGQSSK
ECCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
TSISSEYKLPEKTNTVSTNNSSLGKDEFLKILMTQVQNQDPLNPIDDKEFISQMATFSS
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
LEQMMNLNTTMTQFVENQDPFTTYVDWMGKEVSWTDGKSATDKTGTVSSVKHFKGNYYLV
HHHHHCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEE
LDDGTEISPANVMSVGQSSK
ECCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1828465; 9384377