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The map label for this gene is fliJ

Identifier: 16078688

GI number: 16078688

Start: 1697196

End: 1697639

Strand: Direct

Name: fliJ

Synonym: BSU16250

Alternate gene names: 16078688

Gene position: 1697196-1697639 (Clockwise)

Preceding gene: 255767366

Following gene: 255767367

Centisome position: 40.26

GC content: 31.08

Gene sequence:

>444_bases
GTGGCTTATCAATTTAGATTCCAAAAGCTGCTGGAACTAAAAGAAAATGAAAAAGACCAATCCTTATCCGAATATCAGCA
ATCAGTTTCTGAATTTGAAAACGTTGCTGAAAAATTATATGAGAATATGAGCAAAAAGGAATTGCTGGAACAAAATAAGG
AAAAGAAATTAAAAAGCGGCATGAGTGTACAAGAAATGAGGCACTACCAACAATTTGTCTCAAATCTTGATAATACGATC
TATCACTATCAAAAGCTTGTCATTATGAAAAGAAATCAAATGAATCAAAAACAAGAAATTTTGACAGAGAAAAACATTGA
AGTGAAAAAGTTTGAAAAAATGCGTGAAAAACAGTTTAAAATGTTTGCTCTTGAAGATAAAGCTGCAGAAATGAAAGAAA
TGGACGATATTTCGATTAAGCAGTTTATGATTCAAGGCCATTAG

Upstream 100 bases:

>100_bases
CGCAGCTTATTCAATTTTTAAAGCAGGGAACAGACGAACCGGCTTTATTGGAAGAAAGCATTGCTGCATTAACTAGTTTG
ACAGGAAATGAGGAATAAAC

Downstream 100 bases:

>100_bases
GAGCGAATGTAATGTCCGGCAAAAAGAAAGAATCAGGTAAGTTCCGTTCGGTTTTGCTTATCATTATCCTCCCGCTGATG
TTTCTATTAATCGCAGGGGG

Product: flagellar biosynthesis chaperone

Products: NA

Alternate protein names: Chemotaxis CheF protein

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MAYQFRFQKLLELKENEKDQSLSEYQQSVSEFENVAEKLYENMSKKELLEQNKEKKLKSGMSVQEMRHYQQFVSNLDNTI
YHYQKLVIMKRNQMNQKQEILTEKNIEVKKFEKMREKQFKMFALEDKAAEMKEMDDISIKQFMIQGH

Sequences:

>Translated_147_residues
MAYQFRFQKLLELKENEKDQSLSEYQQSVSEFENVAEKLYENMSKKELLEQNKEKKLKSGMSVQEMRHYQQFVSNLDNTI
YHYQKLVIMKRNQMNQKQEILTEKNIEVKKFEKMREKQFKMFALEDKAAEMKEMDDISIKQFMIQGH
>Mature_146_residues
AYQFRFQKLLELKENEKDQSLSEYQQSVSEFENVAEKLYENMSKKELLEQNKEKKLKSGMSVQEMRHYQQFVSNLDNTIY
HYQKLVIMKRNQMNQKQEILTEKNIEVKKFEKMREKQFKMFALEDKAAEMKEMDDISIKQFMIQGH

Specific function: Flagellar protein that affects chemotactic events

COG id: COG2882

COG function: function code NUO; Flagellar biosynthesis chaperone

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliJ family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FLIJ_BACSU (P20487)

Other databases:

- EMBL:   X56049
- EMBL:   AL009126
- PIR:   A42366
- RefSeq:   NP_389507.1
- ProteinModelPortal:   P20487
- EnsemblBacteria:   EBBACT00000001586
- GeneID:   940137
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU16250
- NMPDR:   fig|224308.1.peg.1627
- GenoList:   BSU16250
- GeneTree:   EBGT00050000001740
- HOGENOM:   HBG725373
- OMA:   QEMRHYQ
- ProtClustDB:   PRK07720
- BioCyc:   BSUB:BSU16250-MONOMER
- GO:   GO:0006935
- InterPro:   IPR012823
- TIGRFAMs:   TIGR02473

Pfam domain/function: PF02050 FliJ

EC number: NA

Molecular weight: Translated: 17909; Mature: 17778

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYQFRFQKLLELKENEKDQSLSEYQQSVSEFENVAEKLYENMSKKELLEQNKEKKLKSG
CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
MSVQEMRHYQQFVSNLDNTIYHYQKLVIMKRNQMNQKQEILTEKNIEVKKFEKMREKQFK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHH
MFALEDKAAEMKEMDDISIKQFMIQGH
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AYQFRFQKLLELKENEKDQSLSEYQQSVSEFENVAEKLYENMSKKELLEQNKEKKLKSG
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
MSVQEMRHYQQFVSNLDNTIYHYQKLVIMKRNQMNQKQEILTEKNIEVKKFEKMREKQFK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHH
MFALEDKAAEMKEMDDISIKQFMIQGH
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1904439; 1828465; 2493450; 9384377