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The map label for this gene is fliF

Identifier: 16078684

GI number: 16078684

Start: 1692496

End: 1694106

Strand: Direct

Name: fliF

Synonym: BSU16210

Alternate gene names: 16078684

Gene position: 1692496-1694106 (Clockwise)

Preceding gene: 16078683

Following gene: 16078685

Centisome position: 40.15

GC content: 39.98

Gene sequence:

>1611_bases
ATGAATCGTACTCTAATGCAAATGAAAAACAAAACGAGTGAGTTTTGGAAAAATAGATCTAAATTACAAAAGATTTTAAT
GGTTAGTGCTTTAGCGGCAATTATTATTATTGGAATTATTATTAGTGTTTTTGCTTCAAATTCTAAAATGGCGCCGCTGT
ACAAAGATTTGTCTGCCGAAGAAGCAGGACAAATCAAAGAAGAATTGGATGCAAAAAAAGTGCCAAACGAACTTTCGAAT
GGCGGTACAGTGATTAGTGTTCCGGAGGATCAGGTTGATTCTTTGAAAGTGCAGATGGCTGCAGAAGGACTTCCTAAAAC
GGGATCAATTGATTATTCGTTTTTTGGACAGAATGCCGGCTTTGGTTTGACAGACAATGAGTTTGATATGGTGAAAGTGA
AAGCTACACAGACAGAACTGTCAAACTTGATCAATGAAATGGACGGTATTAAAAATTCAAAAGTAATGATTAATCTCCCG
AAAGACGCTGTGTTTGTCGGTGAAGAGCAATCTGCAGCATCTGCATCAATCGTTTTGCAGATTCAACCGGGTTATACACT
TGATCAAAGCCAAATCAACGGATTATATCATCTGGTATCTAAAAGCGTGCCAAACCTAAAAGAAGATAACATCGTCATCA
TGGACCAAAATTCTACATACTACGACAAATCAGACAGCGATGCAGGGTCCTACGCGGATAGTTATTCTTCTCAGCAAGGA
ATTAAGTCTCAAGTTGAAAAAGACATTCAAAAACATGTACAGTCACTGCTGGGTACGATGATGGGCCAAGATAAAGTCGT
TGTCTCCGTTACAGCAGACATTGATTTCACAAAAGAAAATCGGACAGAAGACATTGTCGAACCTGTGGATAAAGAAAACA
TGGAAGGCATTGCAGTCAGCGCTGAAAAGGTATCTGAAACATATCAGGGCGACGGTGCAGCCAACGGCGGAACTGCCGGA
ACCGGCGAGGAAGATGTTACAAATTATAAGGCTGACGGTGAAAATACCGAAAGCGGGAACTACGAAAAAAACAGCAACAA
AATCAATTACGAGGTTAACCGAATTCATAAAGAAATCGCTGAAAGTCCTTATAAGGTCAGAGATTTAGGGATTCAAGTAA
TGGTAGAGCCGCCTGATGCCAAAAACACTGCGTCGCTATCAACTGAAAGACAGGATGATATACAAAAAATCCTTTCAACT
GTAGTCAGAACATCTTTGGATAAAGATGAAACGCAAAATCAGAATTTATCTGATGCTGATATCAATAATAAGATTGTTGT
TTCCGTTCAGCCATTCGACGGAAAAGTCAATTTGGATACAAATACGGAAGAATCCTCAGGTATCCCGCTGTGGGCATATA
TTGTAGGCGGTGTTTTAATCGCAGCGATCATTGTTCTGATCATTATGCTTATCAGAAAGAAACGGGCGCAAGAGGATGAA
TTTGAGGAATATGAGTATGAGGTTCCTCAAGAACCAATCAATTTGCCTGATATCAACGAAGAGGAAAATGAAACAGCGGA
ATCAGTCAGACGAAAACAGCTTGAAAAGATGGCGAAAGACAAGCCGGAAGATTTTGCAAAACTGCTGAGAAGCTGGCTGG
CCGAGGATTAG

Upstream 100 bases:

>100_bases
GTTCCGCAATAAAGCTGTGGAAGCTTATCAGGAGATTATGAGAATGCAAATGTAGGGGGTCTGACGATTTAGAGAAAGAG
TGGAATGACCGGGGGTTAAC

Downstream 100 bases:

>100_bases
GAGGAATTAGAAATGGCGAGACGTGATCAAGATAAGCTTACAGGAAAACAAAAAGCAGCCATTCTCATGATTTCCTTGGG
GTTAGATGTGTCAGCTTCTG

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MNRTLMQMKNKTSEFWKNRSKLQKILMVSALAAIIIIGIIISVFASNSKMAPLYKDLSAEEAGQIKEELDAKKVPNELSN
GGTVISVPEDQVDSLKVQMAAEGLPKTGSIDYSFFGQNAGFGLTDNEFDMVKVKATQTELSNLINEMDGIKNSKVMINLP
KDAVFVGEEQSAASASIVLQIQPGYTLDQSQINGLYHLVSKSVPNLKEDNIVIMDQNSTYYDKSDSDAGSYADSYSSQQG
IKSQVEKDIQKHVQSLLGTMMGQDKVVVSVTADIDFTKENRTEDIVEPVDKENMEGIAVSAEKVSETYQGDGAANGGTAG
TGEEDVTNYKADGENTESGNYEKNSNKINYEVNRIHKEIAESPYKVRDLGIQVMVEPPDAKNTASLSTERQDDIQKILST
VVRTSLDKDETQNQNLSDADINNKIVVSVQPFDGKVNLDTNTEESSGIPLWAYIVGGVLIAAIIVLIIMLIRKKRAQEDE
FEEYEYEVPQEPINLPDINEEENETAESVRRKQLEKMAKDKPEDFAKLLRSWLAED

Sequences:

>Translated_536_residues
MNRTLMQMKNKTSEFWKNRSKLQKILMVSALAAIIIIGIIISVFASNSKMAPLYKDLSAEEAGQIKEELDAKKVPNELSN
GGTVISVPEDQVDSLKVQMAAEGLPKTGSIDYSFFGQNAGFGLTDNEFDMVKVKATQTELSNLINEMDGIKNSKVMINLP
KDAVFVGEEQSAASASIVLQIQPGYTLDQSQINGLYHLVSKSVPNLKEDNIVIMDQNSTYYDKSDSDAGSYADSYSSQQG
IKSQVEKDIQKHVQSLLGTMMGQDKVVVSVTADIDFTKENRTEDIVEPVDKENMEGIAVSAEKVSETYQGDGAANGGTAG
TGEEDVTNYKADGENTESGNYEKNSNKINYEVNRIHKEIAESPYKVRDLGIQVMVEPPDAKNTASLSTERQDDIQKILST
VVRTSLDKDETQNQNLSDADINNKIVVSVQPFDGKVNLDTNTEESSGIPLWAYIVGGVLIAAIIVLIIMLIRKKRAQEDE
FEEYEYEVPQEPINLPDINEEENETAESVRRKQLEKMAKDKPEDFAKLLRSWLAED
>Mature_536_residues
MNRTLMQMKNKTSEFWKNRSKLQKILMVSALAAIIIIGIIISVFASNSKMAPLYKDLSAEEAGQIKEELDAKKVPNELSN
GGTVISVPEDQVDSLKVQMAAEGLPKTGSIDYSFFGQNAGFGLTDNEFDMVKVKATQTELSNLINEMDGIKNSKVMINLP
KDAVFVGEEQSAASASIVLQIQPGYTLDQSQINGLYHLVSKSVPNLKEDNIVIMDQNSTYYDKSDSDAGSYADSYSSQQG
IKSQVEKDIQKHVQSLLGTMMGQDKVVVSVTADIDFTKENRTEDIVEPVDKENMEGIAVSAEKVSETYQGDGAANGGTAG
TGEEDVTNYKADGENTESGNYEKNSNKINYEVNRIHKEIAESPYKVRDLGIQVMVEPPDAKNTASLSTERQDDIQKILST
VVRTSLDKDETQNQNLSDADINNKIVVSVQPFDGKVNLDTNTEESSGIPLWAYIVGGVLIAAIIVLIIMLIRKKRAQEDE
FEEYEYEVPQEPINLPDINEEENETAESVRRKQLEKMAKDKPEDFAKLLRSWLAED

Specific function: The M ring may be actively involved in energy transduction

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family

Homologues:

Organism=Escherichia coli, GI1788248, Length=477, Percent_Identity=26.6247379454927, Blast_Score=147, Evalue=1e-36,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLIF_BACSU (P23447)

Other databases:

- EMBL:   M54965
- EMBL:   AL009126
- EMBL:   X56049
- PIR:   JG0022
- RefSeq:   NP_389503.1
- ProteinModelPortal:   P23447
- EnsemblBacteria:   EBBACT00000002619
- GeneID:   936677
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU16210
- NMPDR:   fig|224308.1.peg.1623
- GenoList:   BSU16210
- GeneTree:   EBGT00050000002977
- HOGENOM:   HBG313615
- OMA:   RTIQSIS
- PhylomeDB:   P23447
- ProtClustDB:   PRK06007
- BioCyc:   BSUB:BSU16210-MONOMER
- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182
- PRINTS:   PR01009
- TIGRFAMs:   TIGR00206

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C

EC number: NA

Molecular weight: Translated: 59301; Mature: 59301

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xeccc834)-; HASH(0xd18b75c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTLMQMKNKTSEFWKNRSKLQKILMVSALAAIIIIGIIISVFASNSKMAPLYKDLSAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHH
EAGQIKEELDAKKVPNELSNGGTVISVPEDQVDSLKVQMAAEGLPKTGSIDYSFFGQNAG
HHHHHHHHHHHHHCCHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCC
FGLTDNEFDMVKVKATQTELSNLINEMDGIKNSKVMINLPKDAVFVGEEQSAASASIVLQ
CCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCCCEEEEEE
IQPGYTLDQSQINGLYHLVSKSVPNLKEDNIVIMDQNSTYYDKSDSDAGSYADSYSSQQG
ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
IKSQVEKDIQKHVQSLLGTMMGQDKVVVSVTADIDFTKENRTEDIVEPVDKENMEGIAVS
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEECCCCCCHHHHCCCCCCCCCCEEEE
AEKVSETYQGDGAANGGTAGTGEEDVTNYKADGENTESGNYEKNSNKINYEVNRIHKEIA
HHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH
ESPYKVRDLGIQVMVEPPDAKNTASLSTERQDDIQKILSTVVRTSLDKDETQNQNLSDAD
CCCCEEEECCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCC
INNKIVVSVQPFDGKVNLDTNTEESSGIPLWAYIVGGVLIAAIIVLIIMLIRKKRAQEDE
CCCEEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
FEEYEYEVPQEPINLPDINEEENETAESVRRKQLEKMAKDKPEDFAKLLRSWLAED
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCH
>Mature Secondary Structure
MNRTLMQMKNKTSEFWKNRSKLQKILMVSALAAIIIIGIIISVFASNSKMAPLYKDLSAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHH
EAGQIKEELDAKKVPNELSNGGTVISVPEDQVDSLKVQMAAEGLPKTGSIDYSFFGQNAG
HHHHHHHHHHHHHCCHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCC
FGLTDNEFDMVKVKATQTELSNLINEMDGIKNSKVMINLPKDAVFVGEEQSAASASIVLQ
CCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCCCEEEEEE
IQPGYTLDQSQINGLYHLVSKSVPNLKEDNIVIMDQNSTYYDKSDSDAGSYADSYSSQQG
ECCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
IKSQVEKDIQKHVQSLLGTMMGQDKVVVSVTADIDFTKENRTEDIVEPVDKENMEGIAVS
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEECCCCCCHHHHCCCCCCCCCCEEEE
AEKVSETYQGDGAANGGTAGTGEEDVTNYKADGENTESGNYEKNSNKINYEVNRIHKEIA
HHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH
ESPYKVRDLGIQVMVEPPDAKNTASLSTERQDDIQKILSTVVRTSLDKDETQNQNLSDAD
CCCCEEEECCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCC
INNKIVVSVQPFDGKVNLDTNTEESSGIPLWAYIVGGVLIAAIIVLIIMLIRKKRAQEDE
CCCEEEEEEECCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
FEEYEYEVPQEPINLPDINEEENETAESVRRKQLEKMAKDKPEDFAKLLRSWLAED
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1905667; 9384377; 1828465