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The map label for this gene is ylbC

Identifier: 16078560

GI number: 16078560

Start: 1566379

End: 1567419

Strand: Direct

Name: ylbC

Synonym: BSU14960

Alternate gene names: 16078560

Gene position: 1566379-1567419 (Clockwise)

Preceding gene: 255767340

Following gene: 16078561

Centisome position: 37.16

GC content: 42.27

Gene sequence:

>1041_bases
TTGAAAAATATATTGAGAGCAATGGTTATCCTTTTGATTATCTGCGGAACCTATGTTCTGTTTATTCAATATGGATCTGT
TCCTGAAAAGAAATCAAATGACAGCGAGCCTCAGGTGTCGAATGAGGAAGCGCAAAGCGGCAAACGAATACATATGCCGA
CTTCAGGGTTATTGTCCTTCATGGGCAAGCACGCCGATGAAGTAACGAAAAAGCTTGGGGAACCTGAACGTATTGACCCT
TCGGCTTATGATTACGATTGGTGGGTATACAATCAAGGTAAGGATCAATATATCCAAATCGGGGTATTAAACAATAAAGT
GGTCACATTATTCGCGTCGGGTAATGATATTAACGCCAAGCCTTTCAAAATTGGAGAATCAACTGGCGAAGTATTCAAGA
CCACCCAGGTGGCACCATTTGTGAATGTAGAGTATAAAGGAAATTCCTATCGGTTTGAATTTTCTGAAGAAGATATCAAT
ACAAGACCGACTGTAAAGGTAGGAAAGATGTATGTCCAGCTGTATATGGACAAATTTGAGGGGAAGCTATCCAGCATCAG
GGCGTTTGATGCGCAGACCTTTGTAAAGCAAAGACCTTATGAGGTAGTGTACCGCGGGGAATTAATTAAACCGAAAGCCG
TTTCAGATGAGAAATGGAAAAAGATCCAAACAACGAGCGAAAAGCAAATCCTTGATTTGACGAATGTCATACGCGTTAAA
CATGGACTTGCGAAGCTTGAGTGGGATCAGCCAACGGCGGAAGTGGCATTTGGGCATAGTGAGGATATGAAGGAAAATAA
TTATTTCTCCCATGTCTCTAAAAAATACGGCTCGCTGAAAGACCGCTTAGAAGAAGGGCATGTTGATTTTCAGCAAGCGG
GAGAAAATATCGCATACAATTATGTGGACGGTCCGGCTGCTGTAGAAGGCTGGCTGAATAGCGAAGGCCATCGAAAAGCG
CTTCTGAATTCAGATTATACGCATCTTGGTGTCGGAGTAGACCGGAAATATTACACCCAAAACTTTATTAAGCGATGGTA
A

Upstream 100 bases:

>100_bases
AAGGCTTTTTTCATTAACACATAAATCTTTGACATGTTAAATAGGCTGTATTGTAATGGGATGTAAACAAGAGATTGTGA
ATCGCCACGGGGGTGATAGA

Downstream 100 bases:

>100_bases
TGAAAGCCGCGGACGAATGGTTCCCGGCTTTTTCTATTTCCATACAAGCTGGTCTGAATGAATGTGCTGATAGCTTACAG
ATAAGGCCGTTTCCCATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MKNILRAMVILLIICGTYVLFIQYGSVPEKKSNDSEPQVSNEEAQSGKRIHMPTSGLLSFMGKHADEVTKKLGEPERIDP
SAYDYDWWVYNQGKDQYIQIGVLNNKVVTLFASGNDINAKPFKIGESTGEVFKTTQVAPFVNVEYKGNSYRFEFSEEDIN
TRPTVKVGKMYVQLYMDKFEGKLSSIRAFDAQTFVKQRPYEVVYRGELIKPKAVSDEKWKKIQTTSEKQILDLTNVIRVK
HGLAKLEWDQPTAEVAFGHSEDMKENNYFSHVSKKYGSLKDRLEEGHVDFQQAGENIAYNYVDGPAAVEGWLNSEGHRKA
LLNSDYTHLGVGVDRKYYTQNFIKRW

Sequences:

>Translated_346_residues
MKNILRAMVILLIICGTYVLFIQYGSVPEKKSNDSEPQVSNEEAQSGKRIHMPTSGLLSFMGKHADEVTKKLGEPERIDP
SAYDYDWWVYNQGKDQYIQIGVLNNKVVTLFASGNDINAKPFKIGESTGEVFKTTQVAPFVNVEYKGNSYRFEFSEEDIN
TRPTVKVGKMYVQLYMDKFEGKLSSIRAFDAQTFVKQRPYEVVYRGELIKPKAVSDEKWKKIQTTSEKQILDLTNVIRVK
HGLAKLEWDQPTAEVAFGHSEDMKENNYFSHVSKKYGSLKDRLEEGHVDFQQAGENIAYNYVDGPAAVEGWLNSEGHRKA
LLNSDYTHLGVGVDRKYYTQNFIKRW
>Mature_346_residues
MKNILRAMVILLIICGTYVLFIQYGSVPEKKSNDSEPQVSNEEAQSGKRIHMPTSGLLSFMGKHADEVTKKLGEPERIDP
SAYDYDWWVYNQGKDQYIQIGVLNNKVVTLFASGNDINAKPFKIGESTGEVFKTTQVAPFVNVEYKGNSYRFEFSEEDIN
TRPTVKVGKMYVQLYMDKFEGKLSSIRAFDAQTFVKQRPYEVVYRGELIKPKAVSDEKWKKIQTTSEKQILDLTNVIRVK
HGLAKLEWDQPTAEVAFGHSEDMKENNYFSHVSKKYGSLKDRLEEGHVDFQQAGENIAYNYVDGPAAVEGWLNSEGHRKA
LLNSDYTHLGVGVDRKYYTQNFIKRW

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YLBC_BACSU (O34586)

Other databases:

- EMBL:   Z98682
- EMBL:   AL009126
- PIR:   H69873
- RefSeq:   NP_389379.1
- ProteinModelPortal:   O34586
- EnsemblBacteria:   EBBACT00000003585
- GeneID:   937363
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14960
- NMPDR:   fig|224308.1.peg.1498
- GenoList:   BSU14960
- GeneTree:   EBGT00050000000960
- HOGENOM:   HBG313629
- OMA:   EGWLNSK
- ProtClustDB:   CLSK2391270
- BioCyc:   BSUB:BSU14960-MONOMER
- InterPro:   IPR014044
- Gene3D:   G3DSA:3.40.33.10

Pfam domain/function: PF00188 SCP; SSF55797 SCP-like_extracellular

EC number: NA

Molecular weight: Translated: 39632; Mature: 39632

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xef86b68)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILRAMVILLIICGTYVLFIQYGSVPEKKSNDSEPQVSNEEAQSGKRIHMPTSGLLSF
CHHHHHHHHHHHHHHHHHHEEHCCCCCCCCCCCCCCCCCCCHHHHCCCEEECCHHHHHHH
MGKHADEVTKKLGEPERIDPSAYDYDWWVYNQGKDQYIQIGVLNNKVVTLFASGNDINAK
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCEEEEEEECCCCCCCC
PFKIGESTGEVFKTTQVAPFVNVEYKGNSYRFEFSEEDINTRPTVKVGKMYVQLYMDKFE
CEEECCCCCHHHHHEECCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC
GKLSSIRAFDAQTFVKQRPYEVVYRGELIKPKAVSDEKWKKIQTTSEKQILDLTNVIRVK
CHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHH
HGLAKLEWDQPTAEVAFGHSEDMKENNYFSHVSKKYGSLKDRLEEGHVDFQQAGENIAYN
HCHHEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEE
YVDGPAAVEGWLNSEGHRKALLNSDYTHLGVGVDRKYYTQNFIKRW
ECCCHHHHHHHCCCCCCHHHHCCCCCCEEECCCCHHHHHHHHHHCH
>Mature Secondary Structure
MKNILRAMVILLIICGTYVLFIQYGSVPEKKSNDSEPQVSNEEAQSGKRIHMPTSGLLSF
CHHHHHHHHHHHHHHHHHHEEHCCCCCCCCCCCCCCCCCCCHHHHCCCEEECCHHHHHHH
MGKHADEVTKKLGEPERIDPSAYDYDWWVYNQGKDQYIQIGVLNNKVVTLFASGNDINAK
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCEEEEEEECCCCCCCC
PFKIGESTGEVFKTTQVAPFVNVEYKGNSYRFEFSEEDINTRPTVKVGKMYVQLYMDKFE
CEEECCCCCHHHHHEECCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC
GKLSSIRAFDAQTFVKQRPYEVVYRGELIKPKAVSDEKWKKIQTTSEKQILDLTNVIRVK
CHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHH
HGLAKLEWDQPTAEVAFGHSEDMKENNYFSHVSKKYGSLKDRLEEGHVDFQQAGENIAYN
HCHHEEECCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEE
YVDGPAAVEGWLNSEGHRKALLNSDYTHLGVGVDRKYYTQNFIKRW
ECCCHHHHHHHCCCCCCHHHHCCCCCCEEECCCCHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377