Click here to switch to the map view.

The map label for this gene is yktA

Identifier: 16078528

GI number: 16078528

Start: 1535936

End: 1536202

Strand: Direct

Name: yktA

Synonym: BSU14640

Alternate gene names: 16078528

Gene position: 1535936-1536202 (Clockwise)

Preceding gene: 255767338

Following gene: 16078530

Centisome position: 36.43

GC content: 44.19

Gene sequence:

>267_bases
ATGGAGTATCAATATCCGATGAATGAAGATTGGACAACCGAAGAAGCAGTGGATGTGATTGCATTTTTCCAGCAGGTTGA
GCTTGCATATGAAAAAGGGGCGGATCGTGAAGAACTGCTTAAAGCTTACCGCCGTTTCAAGGAAATTGTACCGGGGAAGG
CCGAAGAAAAAAAGCTATGCGGCGAGTTTGAGGAACAAAGTACATATTCTCCTTATCGCACGGTCAAACAGGCGAGAGAA
TCTGATCACGCGAAGATTAAGATGTAA

Upstream 100 bases:

>100_bases
AATGAATTATATTATGAACTTGAAAGAATGTAAAGAACAATTTATGATCAAATGAAGATGCTTTCTCTTAAGGGAAGTAA
ATCTACAAGGAGTGAAGAAA

Downstream 100 bases:

>100_bases
GAAAAAGAGCCGGGGGATATCCCGGCTCTTTTTTATGCTTGTGTTACTTTTTGGGTGAGACGGTACAGAAAAGCAAGCTG
TTTAAAGGCATCGTCGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MEYQYPMNEDWTTEEAVDVIAFFQQVELAYEKGADREELLKAYRRFKEIVPGKAEEKKLCGEFEEQSTYSPYRTVKQARE
SDHAKIKM

Sequences:

>Translated_88_residues
MEYQYPMNEDWTTEEAVDVIAFFQQVELAYEKGADREELLKAYRRFKEIVPGKAEEKKLCGEFEEQSTYSPYRTVKQARE
SDHAKIKM
>Mature_88_residues
MEYQYPMNEDWTTEEAVDVIAFFQQVELAYEKGADREELLKAYRRFKEIVPGKAEEKKLCGEFEEQSTYSPYRTVKQARE
SDHAKIKM

Specific function: Unknown

COG id: COG4476

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0223 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKTA_BACSU (Q45497)

Other databases:

- EMBL:   AF012285
- EMBL:   AL009126
- PIR:   C69864
- RefSeq:   NP_389347.1
- ProteinModelPortal:   Q45497
- SMR:   Q45497
- EnsemblBacteria:   EBBACT00000002199
- GeneID:   935989
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14640
- NMPDR:   fig|224308.1.peg.1466
- GenoList:   BSU14640
- GeneTree:   EBGT00050000001683
- HOGENOM:   HBG313637
- OMA:   IVPGKAE
- ProtClustDB:   PRK04387
- BioCyc:   BSUB:BSU14640-MONOMER
- HAMAP:   MF_01041
- InterPro:   IPR007920
- PIRSF:   PIRSF037260
- ProDom:   PD062738

Pfam domain/function: PF05256 UPF0223

EC number: NA

Molecular weight: Translated: 10477; Mature: 10477

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYQYPMNEDWTTEEAVDVIAFFQQVELAYEKGADREELLKAYRRFKEIVPGKAEEKKLC
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
GEFEEQSTYSPYRTVKQARESDHAKIKM
HHHHHCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEYQYPMNEDWTTEEAVDVIAFFQQVELAYEKGADREELLKAYRRFKEIVPGKAEEKKLC
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
GEFEEQSTYSPYRTVKQARESDHAKIKM
HHHHHCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969500; 9384377