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The map label for this gene is ykrA

Identifier: 16078519

GI number: 16078519

Start: 1525386

End: 1526159

Strand: Direct

Name: ykrA

Synonym: BSU14550

Alternate gene names: 16078519

Gene position: 1525386-1526159 (Clockwise)

Preceding gene: 255767335

Following gene: 255767337

Centisome position: 36.18

GC content: 42.76

Gene sequence:

>774_bases
ATGGATTCTAAATTAATCTTTTTTGATATTGACGGCACAATATATGATCATGATAAGAATATACCGGAAAGTACGAGAAA
AACCGTGGCGGAGCTTCAGCGCCAAGGGCATCATGTGTTTATTGCCAGCGGCCGGTCTCCATTTTTGGTTAAGCCGATTT
TGGAGGAGCTGGGCATCCACTCATTTATTTCCTACAATGGACAGTTTGTTGTCTTTGAAAATCAAGTGATTTATAAAAAT
CCGCTGCCTGAAAATGCAATCAGGCGATTATTAAAGCAGGCGGATGAAGGCAAGCATCCTGTTGTGTTTATGGCTGAGGA
CACGATGAAAGCGACTGTTGCGGATCACCCCCATGTTCTCGAGGGAATCGGCAGCCTTAAAACAGATTATCCAGAGACCG
ATGACCTTTTTTATGAAGGAAAAGAAATTTTTCAGCTTCTTTTATTTTGTCAGGATGAAGAAGAAAAAGCTTATGCCGCT
TTTCCTGAGTTTGATCTAGTTCGCTGGCATGAGCTATCGACTGATGTTCTGCCGCACGGAGGTTCGAAGGCAGAAGGAAT
CAAAAAAGTGATTGAGCGTCTTCCGTTTGATATCGGCGATACATATGCTTTCGGCGACGGATTAAATGATTTGCAAATGA
TTGAATACGTTGGGACAGGCGTTGCTATGGGAAATGCTGTTCCCGAACTGAAAGAAATCGCGGACTTTGTAACAAAACCG
GTGGACGAGGATGGAATTGCATACGCTGTCAAAGAATTGGGCCTTTTAAAATAA

Upstream 100 bases:

>100_bases
AATTTAATATGATTTTTGAACGAAATTGTTTGCTGAATGACAATCTTTTTGTATGATGAGGGTGGGAATTGCAGACCAAG
ACGATAAAGGGGAAGTTGCG

Downstream 100 bases:

>100_bases
AGAAACGGCTGGCATTGTGCCAGCCGTTTTCTCTTTTAGCGCTCAATTGCGATTGCATTTTCAGGTTCTTTGAAAGGATT
TTCCTTATCAATATGATCAT

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MDSKLIFFDIDGTIYDHDKNIPESTRKTVAELQRQGHHVFIASGRSPFLVKPILEELGIHSFISYNGQFVVFENQVIYKN
PLPENAIRRLLKQADEGKHPVVFMAEDTMKATVADHPHVLEGIGSLKTDYPETDDLFYEGKEIFQLLLFCQDEEEKAYAA
FPEFDLVRWHELSTDVLPHGGSKAEGIKKVIERLPFDIGDTYAFGDGLNDLQMIEYVGTGVAMGNAVPELKEIADFVTKP
VDEDGIAYAVKELGLLK

Sequences:

>Translated_257_residues
MDSKLIFFDIDGTIYDHDKNIPESTRKTVAELQRQGHHVFIASGRSPFLVKPILEELGIHSFISYNGQFVVFENQVIYKN
PLPENAIRRLLKQADEGKHPVVFMAEDTMKATVADHPHVLEGIGSLKTDYPETDDLFYEGKEIFQLLLFCQDEEEKAYAA
FPEFDLVRWHELSTDVLPHGGSKAEGIKKVIERLPFDIGDTYAFGDGLNDLQMIEYVGTGVAMGNAVPELKEIADFVTKP
VDEDGIAYAVKELGLLK
>Mature_257_residues
MDSKLIFFDIDGTIYDHDKNIPESTRKTVAELQRQGHHVFIASGRSPFLVKPILEELGIHSFISYNGQFVVFENQVIYKN
PLPENAIRRLLKQADEGKHPVVFMAEDTMKATVADHPHVLEGIGSLKTDYPETDDLFYEGKEIFQLLLFCQDEEEKAYAA
FPEFDLVRWHELSTDVLPHGGSKAEGIKKVIERLPFDIGDTYAFGDGLNDLQMIEYVGTGVAMGNAVPELKEIADFVTKP
VDEDGIAYAVKELGLLK

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family

Homologues:

Organism=Escherichia coli, GI2367265, Length=289, Percent_Identity=28.0276816608997, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1786982, Length=268, Percent_Identity=25.3731343283582, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKRA_BACSU (Q45494)

Other databases:

- EMBL:   AF012285
- EMBL:   AL009126
- PIR:   C69862
- RefSeq:   NP_389338.1
- HSSP:   Q8A090
- ProteinModelPortal:   Q45494
- SMR:   Q45494
- EnsemblBacteria:   EBBACT00000000458
- GeneID:   939479
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14550
- NMPDR:   fig|224308.1.peg.1457
- GenoList:   BSU14550
- GeneTree:   EBGT00070000031729
- HOGENOM:   HBG728500
- OMA:   HHVFIAS
- PhylomeDB:   Q45494
- ProtClustDB:   CLSK2391269
- BioCyc:   BSUB:BSU14550-MONOMER
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150
- Gene3D:   G3DSA:3.40.50.1000
- TIGRFAMs:   TIGR00099
- TIGRFAMs:   TIGR01484

Pfam domain/function: PF00702 Hydrolase; SSF56784 SSF56784

EC number: NA

Molecular weight: Translated: 28905; Mature: 28905

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS01228 COF_1; PS01229 COF_2

Important sites: ACT_SITE 9-9

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSKLIFFDIDGTIYDHDKNIPESTRKTVAELQRQGHHVFIASGRSPFLVKPILEELGIH
CCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHCCCH
SFISYNGQFVVFENQVIYKNPLPENAIRRLLKQADEGKHPVVFMAEDTMKATVADHPHVL
HHHHCCCEEEEEECEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCCHHH
EGIGSLKTDYPETDDLFYEGKEIFQLLLFCQDEEEKAYAAFPEFDLVRWHELSTDVLPHG
HHHHHHCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHCCCCCCCCC
GSKAEGIKKVIERLPFDIGDTYAFGDGLNDLQMIEYVGTGVAMGNAVPELKEIADFVTKP
CCHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCC
VDEDGIAYAVKELGLLK
CCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MDSKLIFFDIDGTIYDHDKNIPESTRKTVAELQRQGHHVFIASGRSPFLVKPILEELGIH
CCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCEEHHHHHHHCCCH
SFISYNGQFVVFENQVIYKNPLPENAIRRLLKQADEGKHPVVFMAEDTMKATVADHPHVL
HHHHCCCEEEEEECEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCCHHH
EGIGSLKTDYPETDDLFYEGKEIFQLLLFCQDEEEKAYAAFPEFDLVRWHELSTDVLPHG
HHHHHHCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHCCCCCCCCC
GSKAEGIKKVIERLPFDIGDTYAFGDGLNDLQMIEYVGTGVAMGNAVPELKEIADFVTKP
CCHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHCC
VDEDGIAYAVKELGLLK
CCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377