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The map label for this gene is ykoA

Identifier: 16078506

GI number: 16078506

Start: 1511923

End: 1512192

Strand: Reverse

Name: ykoA

Synonym: BSU14420

Alternate gene names: 16078506

Gene position: 1512192-1511923 (Counterclockwise)

Preceding gene: 16078509

Following gene: 16078489

Centisome position: 35.87

GC content: 37.78

Gene sequence:

>270_bases
TTGAGGCTTTTAACACTTACTGAATATTGCTTACTGATCTTTTTTACGGGCTTTTACCTTGCCGTAACAGGCTTTACCGC
CAAAGATATCGGCTTATATATAGGCATAGCCCTTATTTACATATTTTCGCACATTTTTTCTAAACGGCTATTAGAAAAGC
GCGGAAAAGAGAACAAACAGGTTCACCTTTTCTTCAGTGTGCTGGCTATTATCGGTTCAGTGTTCATCACGGTTTTATGC
ATTGCATTGGTCGCTTCTTTTTCAAAATAA

Upstream 100 bases:

>100_bases
GAGAGAAAACACTTATACACCCAAACCAGCCAGCTGTGTTACAATTAAAGAGAGAGAATGCATCCGCCTGGAAAATTACA
CACTCTCATGGAGGAACACG

Downstream 100 bases:

>100_bases
AAACGCCTGCTGTCCTAGGCCAGCAAGGCGTTTTTATTTTGTTTGACGCATTTCGTTAAACGGGAAAAAGACAAACTTCG
ATGTGCCGACAATTCGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MRLLTLTEYCLLIFFTGFYLAVTGFTAKDIGLYIGIALIYIFSHIFSKRLLEKRGKENKQVHLFFSVLAIIGSVFITVLC
IALVASFSK

Sequences:

>Translated_89_residues
MRLLTLTEYCLLIFFTGFYLAVTGFTAKDIGLYIGIALIYIFSHIFSKRLLEKRGKENKQVHLFFSVLAIIGSVFITVLC
IALVASFSK
>Mature_89_residues
MRLLTLTEYCLLIFFTGFYLAVTGFTAKDIGLYIGIALIYIFSHIFSKRLLEKRGKENKQVHLFFSVLAIIGSVFITVLC
IALVASFSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKOA_BACSU (O31715)

Other databases:

- EMBL:   AF012285
- EMBL:   AL009126
- PIR:   F69858
- RefSeq:   NP_389325.1
- EnsemblBacteria:   EBBACT00000002287
- GeneID:   938768
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14420
- NMPDR:   fig|224308.1.peg.1444
- GenoList:   BSU14420
- GeneTree:   EBGT00050000002511
- HOGENOM:   HBG337966
- OMA:   EYCLLIF
- ProtClustDB:   CLSK887235
- BioCyc:   BSUB:BSU14420-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10058; Mature: 10058

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe4dea1c)-; HASH(0xecc394c)-; HASH(0xdd98ad0)-;

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLTLTEYCLLIFFTGFYLAVTGFTAKDIGLYIGIALIYIFSHIFSKRLLEKRGKENKQ
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VHLFFSVLAIIGSVFITVLCIALVASFSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MRLLTLTEYCLLIFFTGFYLAVTGFTAKDIGLYIGIALIYIFSHIFSKRLLEKRGKENKQ
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
VHLFFSVLAIIGSVFITVLCIALVASFSK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377