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The map label for this gene is ykuK

Identifier: 16078475

GI number: 16078475

Start: 1484466

End: 1484984

Strand: Direct

Name: ykuK

Synonym: BSU14110

Alternate gene names: 16078475

Gene position: 1484466-1484984 (Clockwise)

Preceding gene: 16078474

Following gene: 16078476

Centisome position: 35.21

GC content: 43.74

Gene sequence:

>519_bases
ATGGCTGATTCTTTTCTGTTTTATAATCTTTCAGAAGCACAGATGACCTTTCAAGATGTGATGGAACGGCTTAAAGCCTT
TGTTCAAAAGGACCCCCGTTCTTCTTATGTGTTATCGATCGGAACCGATTCACAGGTTTACCGCGATTACACAAAGTTTA
TTACCGCATTGCATTTGCATCGTACAGGCAAGGGAGCTTGGGGCTGCTTGAAAAATCATACAGTCGACAGACCCATACAT
AGCCTTCGGGAGAAGATTTCGTTAGAAACGGCGTACAGCCAAGAAACGGCCGCTCATATTCTTGATGGACACTTAATGGA
TATTACCGATCTGCTCCTGCCCTTTACCGGTGAGGGGGCGGATCTTACCTTTGAAGTTCACTTGGATATTGGGAAAAAAG
GGCTTACAAAAGATCTGATCCAAGAAATGACTGGACGTATTACCTCCATGGGGATTGAGGCCAAAATAAAGCCGGATTCA
TACACTGCCTTCAGCTATGCAAATCGTTTCACAAAATAA

Upstream 100 bases:

>100_bases
AATAGGGGGAACAAGCTTCCGCCTTTGCAAAAGTAATCGAAATAAACGGTAAGGAACATACTTGTTTCATGGTTGTAAAT
CCTTGAAAAGGAGTGTCGTG

Downstream 100 bases:

>100_bases
TTTGGCTGAAAAAGCCAAGGTAAATGTCGAATTATGCGGTTGACGTTTGTTATCTGATTACTTATTCTAGCGGTAGAGCT
GAAAGTAAGTTGTCTTGCTT

Product: RNAse

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MADSFLFYNLSEAQMTFQDVMERLKAFVQKDPRSSYVLSIGTDSQVYRDYTKFITALHLHRTGKGAWGCLKNHTVDRPIH
SLREKISLETAYSQETAAHILDGHLMDITDLLLPFTGEGADLTFEVHLDIGKKGLTKDLIQEMTGRITSMGIEAKIKPDS
YTAFSYANRFTK

Sequences:

>Translated_172_residues
MADSFLFYNLSEAQMTFQDVMERLKAFVQKDPRSSYVLSIGTDSQVYRDYTKFITALHLHRTGKGAWGCLKNHTVDRPIH
SLREKISLETAYSQETAAHILDGHLMDITDLLLPFTGEGADLTFEVHLDIGKKGLTKDLIQEMTGRITSMGIEAKIKPDS
YTAFSYANRFTK
>Mature_171_residues
ADSFLFYNLSEAQMTFQDVMERLKAFVQKDPRSSYVLSIGTDSQVYRDYTKFITALHLHRTGKGAWGCLKNHTVDRPIHS
LREKISLETAYSQETAAHILDGHLMDITDLLLPFTGEGADLTFEVHLDIGKKGLTKDLIQEMTGRITSMGIEAKIKPDSY
TAFSYANRFTK

Specific function: Unknown

COG id: COG1978

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YKUK_BACSU (O34776)

Other databases:

- EMBL:   AJ222587
- EMBL:   AL009126
- PIR:   H69865
- RefSeq:   NP_389294.1
- EnsemblBacteria:   EBBACT00000000494
- GeneID:   939213
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU14110
- NMPDR:   fig|224308.1.peg.1413
- GenoList:   BSU14110
- GeneTree:   EBGT00050000000926
- HOGENOM:   HBG363875
- OMA:   LIQEMTG
- ProtClustDB:   CLSK887219
- BioCyc:   BSUB:BSU14110-MONOMER
- InterPro:   IPR007405

Pfam domain/function: PF04308 DUF458

EC number: NA

Molecular weight: Translated: 19486; Mature: 19355

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSFLFYNLSEAQMTFQDVMERLKAFVQKDPRSSYVLSIGTDSQVYRDYTKFITALHLH
CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
RTGKGAWGCLKNHTVDRPIHSLREKISLETAYSQETAAHILDGHLMDITDLLLPFTGEGA
CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
DLTFEVHLDIGKKGLTKDLIQEMTGRITSMGIEAKIKPDSYTAFSYANRFTK
CEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCC
>Mature Secondary Structure 
ADSFLFYNLSEAQMTFQDVMERLKAFVQKDPRSSYVLSIGTDSQVYRDYTKFITALHLH
CCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
RTGKGAWGCLKNHTVDRPIHSLREKISLETAYSQETAAHILDGHLMDITDLLLPFTGEGA
CCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
DLTFEVHLDIGKKGLTKDLIQEMTGRITSMGIEAKIKPDSYTAFSYANRFTK
CEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377