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The map label for this gene is xkdU

Identifier: 16078339

GI number: 16078339

Start: 1342380

End: 1342958

Strand: Direct

Name: xkdU

Synonym: BSU12740

Alternate gene names: 16078339

Gene position: 1342380-1342958 (Clockwise)

Preceding gene: 16078338

Following gene: 255767295

Centisome position: 31.84

GC content: 48.53

Gene sequence:

>579_bases
TTGAGCAAACAAGATGACATGCGAGCTTATCTGCCGCCGTTTCTCACCAGCCTTAAAGAAATGGCCGAGCTGCTGAAAGC
GGAAGCGCCTGAGTTTGATAAACAAAATGACAGCATATTTGATCTGACGGATCAGTTATTCGTACCGACGGCGACTTGGG
GGCTCAGCCGCTGGGAAAAAATTTTAAACGTCCCGCGGGAATCAGGCGACACTGATGAGATCAGACGATTGCGGCTCATT
TCCAAAATGTCGAACATCCCGCCAATCACATACAGGGCCATTGAGCAGGCGGTAAACCGTTTCTTGAAAAACCCGTCTGC
ACAGGTCCGCCTGCTTCCCGGCGAATACCGATTTAACGTCGATATCAATGTTGATGACCTCCAGCACATGAATGAGCTGA
TCGAAGCGATAGAAAACATGAAACCCGCTCATTTGGCGTATACGCTCAGAGGCGGATTGAATGAGACGCTGCGAATCAAA
GATACAGTCATCCTGAATCACCGCAGATACCGAACAGCCAGTGAGCTCAAGGTCGGTTATTCTGTCACTCTTAACAACAA
TGAGGTGGTTTTAACTTGA

Upstream 100 bases:

>100_bases
CCATCAGTCAGTGACTACTCCAATATTCAAATCAACGGCACGTCTGAAAATCTGGTGCTGAGCGACGTGGAAATTCCTAA
GCTTGGGCAGGTGAAGATCA

Downstream 100 bases:

>100_bases
TTTCAACCATATACAGAGAACGCACAGCGGCTGATCTAAAAAGCAGAATCGATCACGTGCTGCTCAACGGCCAAAAAACA
GAAATAGTAGAGCTCGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSKQDDMRAYLPPFLTSLKEMAELLKAEAPEFDKQNDSIFDLTDQLFVPTATWGLSRWEKILNVPRESGDTDEIRRLRLI
SKMSNIPPITYRAIEQAVNRFLKNPSAQVRLLPGEYRFNVDINVDDLQHMNELIEAIENMKPAHLAYTLRGGLNETLRIK
DTVILNHRRYRTASELKVGYSVTLNNNEVVLT

Sequences:

>Translated_192_residues
MSKQDDMRAYLPPFLTSLKEMAELLKAEAPEFDKQNDSIFDLTDQLFVPTATWGLSRWEKILNVPRESGDTDEIRRLRLI
SKMSNIPPITYRAIEQAVNRFLKNPSAQVRLLPGEYRFNVDINVDDLQHMNELIEAIENMKPAHLAYTLRGGLNETLRIK
DTVILNHRRYRTASELKVGYSVTLNNNEVVLT
>Mature_191_residues
SKQDDMRAYLPPFLTSLKEMAELLKAEAPEFDKQNDSIFDLTDQLFVPTATWGLSRWEKILNVPRESGDTDEIRRLRLIS
KMSNIPPITYRAIEQAVNRFLKNPSAQVRLLPGEYRFNVDINVDDLQHMNELIEAIENMKPAHLAYTLRGGLNETLRIKD
TVILNHRRYRTASELKVGYSVTLNNNEVVLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqcA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XKDU_BACSU (P54340)

Other databases:

- EMBL:   Z70177
- EMBL:   AL009126
- PIR:   D69733
- RefSeq:   NP_389156.1
- EnsemblBacteria:   EBBACT00000002559
- GeneID:   936476
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12740
- NMPDR:   fig|224308.1.peg.1275
- GenoList:   BSU12740
- GeneTree:   EBGT00050000006428
- HOGENOM:   HBG348928
- OMA:   QISEDNI
- ProtClustDB:   CLSK626492
- BioCyc:   BSUB:BSU12740-MONOMER
- InterPro:   IPR018755

Pfam domain/function: PF10076 DUF2313

EC number: NA

Molecular weight: Translated: 22175; Mature: 22043

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQDDMRAYLPPFLTSLKEMAELLKAEAPEFDKQNDSIFDLTDQLFVPTATWGLSRWEK
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECHHHHCCCCHHHHHHHHHH
ILNVPRESGDTDEIRRLRLISKMSNIPPITYRAIEQAVNRFLKNPSAQVRLLPGEYRFNV
HHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEE
DINVDDLQHMNELIEAIENMKPAHLAYTLRGGLNETLRIKDTVILNHRRYRTASELKVGY
ECCHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCEEEEEEEEECCHHHCCHHHEEECE
SVTLNNNEVVLT
EEEECCCEEEEC
>Mature Secondary Structure 
SKQDDMRAYLPPFLTSLKEMAELLKAEAPEFDKQNDSIFDLTDQLFVPTATWGLSRWEK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECHHHHCCCCHHHHHHHHHH
ILNVPRESGDTDEIRRLRLISKMSNIPPITYRAIEQAVNRFLKNPSAQVRLLPGEYRFNV
HHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEE
DINVDDLQHMNELIEAIENMKPAHLAYTLRGGLNETLRIKDTVILNHRRYRTASELKVGY
ECCHHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCEEEEEEEEECCHHHCCHHHEEECE
SVTLNNNEVVLT
EEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377