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The map label for this gene is xkdM

Identifier: 16078331

GI number: 16078331

Start: 1333804

End: 1334247

Strand: Direct

Name: xkdM

Synonym: BSU12660

Alternate gene names: 16078331

Gene position: 1333804-1334247 (Clockwise)

Preceding gene: 255767290

Following gene: 255767291

Centisome position: 31.64

GC content: 45.95

Gene sequence:

>444_bases
ATGGCATTAAAAGCACAAAACACAATCTCAGGAAAAGAAGGCCGTTTATTCCTCGATGGTGAGGAAATGGCACACATCAA
AACTTTTGAAGCAAACGTCGAGAAAAACAAGTCTGAAGTCAACATTATGGGCCGCCGCATGACAGGCCATAAAACAACAG
GGGCAAATGGAACAGGGACCGCGACGTTCTACAAAGTCACATCAAAATTCGTGCTATTGATGATGGACTATGTCAAAAAA
GGCAGCGACCCTTATTTCACGCTCCAAGCTGTGCTGGATGATCAATCCTCCGGCCGGGGCACAGAGCGAGTCACGCTGTA
CGACGTCAACTTTGACTCTGCCAAAATCGCAAGCCTTGATGTCGATTCAGAAGCGTTAGAGGAAGAAGTTCCATTTACAT
TCGAAGACTTCGACGTCCCTGAAAAGCTATCTGACACGTTTTAA

Upstream 100 bases:

>100_bases
ATTTCAATGAATGAAGATCGTGACGGCTTCTTGATTGACCTGGCTGTACAGCCTGTCGACGCAGCAGAAAAATTCTACTT
TAATGTGGAGGTAAACTAAT

Downstream 100 bases:

>100_bases
TCAAAGCTGAATCAGCCCATACGCAGACCTTTCTCAGAAAGGTCTGTTTTTTAAAGATGAAACCAAACAATAGACAAGGG
AGTTTTTTTACATGAGCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MALKAQNTISGKEGRLFLDGEEMAHIKTFEANVEKNKSEVNIMGRRMTGHKTTGANGTGTATFYKVTSKFVLLMMDYVKK
GSDPYFTLQAVLDDQSSGRGTERVTLYDVNFDSAKIASLDVDSEALEEEVPFTFEDFDVPEKLSDTF

Sequences:

>Translated_147_residues
MALKAQNTISGKEGRLFLDGEEMAHIKTFEANVEKNKSEVNIMGRRMTGHKTTGANGTGTATFYKVTSKFVLLMMDYVKK
GSDPYFTLQAVLDDQSSGRGTERVTLYDVNFDSAKIASLDVDSEALEEEVPFTFEDFDVPEKLSDTF
>Mature_146_residues
ALKAQNTISGKEGRLFLDGEEMAHIKTFEANVEKNKSEVNIMGRRMTGHKTTGANGTGTATFYKVTSKFVLLMMDYVKKG
SDPYFTLQAVLDDQSSGRGTERVTLYDVNFDSAKIASLDVDSEALEEEVPFTFEDFDVPEKLSDTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqbM

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XKDM_BACSU (P54332)

Other databases:

- EMBL:   Z70177
- EMBL:   AL009126
- PIR:   D69732
- RefSeq:   NP_389148.1
- PDB:   2GUJ
- PDBsum:   2GUJ
- ProteinModelPortal:   P54332
- SMR:   P54332
- EnsemblBacteria:   EBBACT00000002821
- GeneID:   938181
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12660
- NMPDR:   fig|224308.1.peg.1267
- GenoList:   BSU12660
- GeneTree:   EBGT00050000006601
- HOGENOM:   HBG345198
- OMA:   RNEELFY
- ProtClustDB:   CLSK887129
- BioCyc:   BSUB:BSU12660-MONOMER
- InterPro:   IPR018989

Pfam domain/function: PF09393 DUF2001

EC number: NA

Molecular weight: Translated: 16355; Mature: 16224

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKAQNTISGKEGRLFLDGEEMAHIKTFEANVEKNKSEVNIMGRRMTGHKTTGANGTGT
CCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCC
ATFYKVTSKFVLLMMDYVKKGSDPYFTLQAVLDDQSSGRGTERVTLYDVNFDSAKIASLD
EEHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEC
VDSEALEEEVPFTFEDFDVPEKLSDTF
CCHHHHHHHCCCEECCCCCCHHHCCCC
>Mature Secondary Structure 
ALKAQNTISGKEGRLFLDGEEMAHIKTFEANVEKNKSEVNIMGRRMTGHKTTGANGTGT
CCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCC
ATFYKVTSKFVLLMMDYVKKGSDPYFTLQAVLDDQSSGRGTERVTLYDVNFDSAKIASLD
EEHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEC
VDSEALEEEVPFTFEDFDVPEKLSDTF
CCHHHHHHHCCCEECCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377