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The map label for this gene is xkdH

Identifier: 16078327

GI number: 16078327

Start: 1330892

End: 1331248

Strand: Direct

Name: xkdH

Synonym: BSU12620

Alternate gene names: 16078327

Gene position: 1330892-1331248 (Clockwise)

Preceding gene: 255767288

Following gene: 16078328

Centisome position: 31.57

GC content: 47.34

Gene sequence:

>357_bases
ATGAGCTACAGGCAGATGCTCATTCACCGCTGCGATATTTATCATGAAGCAGCGCAAGCGCCGTCTGCAGGCCGATTTGG
GATTCCGGCAGACAGGCTGCAGCCGGTGATTTCATATCCGGATACACCCGATGAACAAGATGTCCCTTGTTATTTTACCG
AAAAAACACAGCAGCTGATTCAGGAGGAGCCGGATCAAACTGTATATCATAGCTTTCTCGTCCATTTTCCGTTGTCAGCG
GACATCCGCGTGAACGATAAAATCATTTGGGAGAATCATAAATATATACTAAAGCTGCCGAAAAGGATCAGACATCATCA
TTGGGAGGTCGTCGCAGTCAGGGATGAAAGCCTATGA

Upstream 100 bases:

>100_bases
GAGAAGGCAGGATTCAGCGGCCTGAGGTGTATCATTTGCTCGAAGAGTTTATTAAGCCGGGCTACGTCCCTGAATCCTCC
AGACTGAAGGTGAGATCTTT

Downstream 100 bases:

>100_bases
AAATAGCGGGATTGAAACAGCTGAACACGGCATTAAAAGAAGCGGCTTCAGGCGGTTTTTCCAGACAGGCGTCCCGGTGG
CTTGAGGAGTGCGGGCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSYRQMLIHRCDIYHEAAQAPSAGRFGIPADRLQPVISYPDTPDEQDVPCYFTEKTQQLIQEEPDQTVYHSFLVHFPLSA
DIRVNDKIIWENHKYILKLPKRIRHHHWEVVAVRDESL

Sequences:

>Translated_118_residues
MSYRQMLIHRCDIYHEAAQAPSAGRFGIPADRLQPVISYPDTPDEQDVPCYFTEKTQQLIQEEPDQTVYHSFLVHFPLSA
DIRVNDKIIWENHKYILKLPKRIRHHHWEVVAVRDESL
>Mature_117_residues
SYRQMLIHRCDIYHEAAQAPSAGRFGIPADRLQPVISYPDTPDEQDVPCYFTEKTQQLIQEEPDQTVYHSFLVHFPLSAD
IRVNDKIIWENHKYILKLPKRIRHHHWEVVAVRDESL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqbH

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XKDH_BACSU (P54328)

Other databases:

- EMBL:   Z70177
- EMBL:   AL009126
- PIR:   H69731
- RefSeq:   NP_389144.1
- PDB:   3F3B
- PDBsum:   3F3B
- ProteinModelPortal:   P54328
- SMR:   P54328
- EnsemblBacteria:   EBBACT00000000118
- GeneID:   936470
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12620
- NMPDR:   fig|224308.1.peg.1263
- GenoList:   BSU12620
- GeneTree:   EBGT00050000006529
- HOGENOM:   HBG345202
- ProtClustDB:   CLSK887125
- BioCyc:   BSUB:BSU12620-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13979; Mature: 13848

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYRQMLIHRCDIYHEAAQAPSAGRFGIPADRLQPVISYPDTPDEQDVPCYFTEKTQQLI
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCEEECHHHHHHH
QEEPDQTVYHSFLVHFPLSADIRVNDKIIWENHKYILKLPKRIRHHHWEVVAVRDESL
HCCCCHHHHHHHHHHCCCCCCEEECCEEEECCCHHEEHHHHHHHHCCEEEEEEECCCC
>Mature Secondary Structure 
SYRQMLIHRCDIYHEAAQAPSAGRFGIPADRLQPVISYPDTPDEQDVPCYFTEKTQQLI
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCEEECHHHHHHH
QEEPDQTVYHSFLVHFPLSADIRVNDKIIWENHKYILKLPKRIRHHHWEVVAVRDESL
HCCCCHHHHHHHHHHCCCCCCEEECCEEEECCCHHEEHHHHHHHHCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377