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The map label for this gene is xkdG

Identifier: 16078326

GI number: 16078326

Start: 1329555

End: 1330490

Strand: Direct

Name: xkdG

Synonym: BSU12610

Alternate gene names: 16078326

Gene position: 1329555-1330490 (Clockwise)

Preceding gene: 255767287

Following gene: 255767288

Centisome position: 31.54

GC content: 47.76

Gene sequence:

>936_bases
TTGAGAAATCAAGAGATCATTCGGAAAGCGGAAATGTCGCTTTCTGCTTTAAAAAGCGGCGGGCTTATGAACCCTGCGCA
AGCATCGGCTTTTATCCGCATGGTGCAAAACACGCCGACCATTTTCAGTGAATCCCGCGTGATTCAAATGGAAAACGATT
CGCAAAAATTTGAAAAAATCGGCTTCGGCCAGCGTATTCTGCGGGCTGCGCAAGAAGGAAAAGCACTGTCAAACGACGAG
CTGACAGTTCCAACGACAAGCACTGTCCAGCTGAACACGAAGGAAGTCATTGCGGAAATCAACATTACGTATGACACACT
TGAAAACAATATTGAAAAAGACGGCCTGCAGCAGACAATCATGCAAATTTTAGCAGAGCGCGCAGCAGTTGATATTGAAG
AGCTGATCGTTAACGGCGATACAGCATCAGCTGATCCGTATCTGGCACAGCTGGACGGCATCCGTAAACAGGCGGTTTCC
CATATCGTTGACATGAACGGTGAAGAACTGTCCAGAGCGACATTCAAGAAGGGCTTAAAGGCAGTTCCGCCGAAATATTT
GCGCATCCCTCAGGAATTCAGATTCTATACGTCTCACGGCTTAGAAGTTGAATGGAAGGACCGCGTGGCAGACCGCCAGA
CAAACCTTGGGGACCAAGCTGTTCAGGGCGGCTTGTCAACAGCATTCGGCGTACCGGTCAAAGGGGTATCCAATATTCAG
CCGTACACAGTCGGTGAGGGAGACGCGCAATATGACGCTTCTGATATCATTCTCACACATCCGAAAAATATCATTCTCGG
CTTCTCCCGCAATATCCGAATTGAAGTCGACAAAGACATCCGCTCCCGTAAATTCATTATTGTCTTAACGGCCAAGCTGG
ACAGCAAGTTCGAGGAAGAGGATGCCTGCGCGAAATTAATTAACGTAAAAGAATAA

Upstream 100 bases:

>100_bases
TCTAAGCAGACAGCGGACGATACGGGCGGCAATACAGAGCAAGTCAAAAAATCAATCTGGAGCGGACTGCTGTAAAACCA
GTCAAGGAGGAGGAAATCAA

Downstream 100 bases:

>100_bases
TAGAAACGAGGTGGTCAGCTCATGCTCATTGAACCGACTGACGTAGCTTCCTATTCGGTCTATGATCGGGTGAAAAACAG
GCCGGAAGAGCTGCTGGCGC

Product: capsid protein of PBSX prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MRNQEIIRKAEMSLSALKSGGLMNPAQASAFIRMVQNTPTIFSESRVIQMENDSQKFEKIGFGQRILRAAQEGKALSNDE
LTVPTTSTVQLNTKEVIAEINITYDTLENNIEKDGLQQTIMQILAERAAVDIEELIVNGDTASADPYLAQLDGIRKQAVS
HIVDMNGEELSRATFKKGLKAVPPKYLRIPQEFRFYTSHGLEVEWKDRVADRQTNLGDQAVQGGLSTAFGVPVKGVSNIQ
PYTVGEGDAQYDASDIILTHPKNIILGFSRNIRIEVDKDIRSRKFIIVLTAKLDSKFEEEDACAKLINVKE

Sequences:

>Translated_311_residues
MRNQEIIRKAEMSLSALKSGGLMNPAQASAFIRMVQNTPTIFSESRVIQMENDSQKFEKIGFGQRILRAAQEGKALSNDE
LTVPTTSTVQLNTKEVIAEINITYDTLENNIEKDGLQQTIMQILAERAAVDIEELIVNGDTASADPYLAQLDGIRKQAVS
HIVDMNGEELSRATFKKGLKAVPPKYLRIPQEFRFYTSHGLEVEWKDRVADRQTNLGDQAVQGGLSTAFGVPVKGVSNIQ
PYTVGEGDAQYDASDIILTHPKNIILGFSRNIRIEVDKDIRSRKFIIVLTAKLDSKFEEEDACAKLINVKE
>Mature_311_residues
MRNQEIIRKAEMSLSALKSGGLMNPAQASAFIRMVQNTPTIFSESRVIQMENDSQKFEKIGFGQRILRAAQEGKALSNDE
LTVPTTSTVQLNTKEVIAEINITYDTLENNIEKDGLQQTIMQILAERAAVDIEELIVNGDTASADPYLAQLDGIRKQAVS
HIVDMNGEELSRATFKKGLKAVPPKYLRIPQEFRFYTSHGLEVEWKDRVADRQTNLGDQAVQGGLSTAFGVPVKGVSNIQ
PYTVGEGDAQYDASDIILTHPKNIILGFSRNIRIEVDKDIRSRKFIIVLTAKLDSKFEEEDACAKLINVKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqbE

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XKDG_BACSU (P54327)

Other databases:

- EMBL:   Z70177
- EMBL:   AL009126
- PIR:   G69731
- RefSeq:   NP_389143.1
- ProteinModelPortal:   P54327
- EnsemblBacteria:   EBBACT00000000743
- GeneID:   939845
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12610
- NMPDR:   fig|224308.1.peg.1262
- GenoList:   BSU12610
- GeneTree:   EBGT00050000005975
- HOGENOM:   HBG345203
- OMA:   KFEEEDA
- ProtClustDB:   CLSK887124
- BioCyc:   BSUB:BSU12610-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34615; Mature: 34615

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNQEIIRKAEMSLSALKSGGLMNPAQASAFIRMVQNTPTIFSESRVIQMENDSQKFEKI
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEECCCEEEEECCCHHHHHHH
GFGQRILRAAQEGKALSNDELTVPTTSTVQLNTKEVIAEINITYDTLENNIEKDGLQQTI
CHHHHHHHHHHHCCCCCCCCEECCCCCEEEECHHHEEEEEEEEHHHHHCCCCHHHHHHHH
MQILAERAAVDIEELIVNGDTASADPYLAQLDGIRKQAVSHIVDMNGEELSRATFKKGLK
HHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHH
AVPPKYLRIPQEFRFYTSHGLEVEWKDRVADRQTNLGDQAVQGGLSTAFGVPVKGVSNIQ
CCCHHHHCCCHHHHHHHCCCCEEEHHHHHHHHHCCCCHHHHHCCCHHHCCCCCCCCCCCC
PYTVGEGDAQYDASDIILTHPKNIILGFSRNIRIEVDKDIRSRKFIIVLTAKLDSKFEEE
CEECCCCCCCCCCCCEEEECCCEEEEEECCCEEEEECCCCCCCEEEEEEEECCCCCCCHH
DACAKLINVKE
HHHHHHHCCCC
>Mature Secondary Structure
MRNQEIIRKAEMSLSALKSGGLMNPAQASAFIRMVQNTPTIFSESRVIQMENDSQKFEKI
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEECCCEEEEECCCHHHHHHH
GFGQRILRAAQEGKALSNDELTVPTTSTVQLNTKEVIAEINITYDTLENNIEKDGLQQTI
CHHHHHHHHHHHCCCCCCCCEECCCCCEEEECHHHEEEEEEEEHHHHHCCCCHHHHHHHH
MQILAERAAVDIEELIVNGDTASADPYLAQLDGIRKQAVSHIVDMNGEELSRATFKKGLK
HHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHH
AVPPKYLRIPQEFRFYTSHGLEVEWKDRVADRQTNLGDQAVQGGLSTAFGVPVKGVSNIQ
CCCHHHHCCCHHHHHHHCCCCEEEHHHHHHHHHCCCCHHHHHCCCHHHCCCCCCCCCCCC
PYTVGEGDAQYDASDIILTHPKNIILGFSRNIRIEVDKDIRSRKFIIVLTAKLDSKFEEE
CEECCCCCCCCCCCCEEEECCCEEEEEECCCEEEEECCCCCCCEEEEEEEECCCCCCCHH
DACAKLINVKE
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10658653