Click here to switch to the map view.

The map label for this gene is yjiA

Identifier: 16078285

GI number: 16078285

Start: 1290675

End: 1290953

Strand: Reverse

Name: yjiA

Synonym: BSU12200

Alternate gene names: 16078285

Gene position: 1290953-1290675 (Counterclockwise)

Preceding gene: 255767277

Following gene: 16078280

Centisome position: 30.62

GC content: 39.07

Gene sequence:

>279_bases
GTGGCAGCACAGACTGATTACAAAAAACAAGTTGTCGGAATCCTACTTTCACTTGCATTCGTACTCTTTGTGTTCTCTTT
TTCTGAGAGACATGAAAAACCGCTTGTTGAGGGAAAAAAACAGGAAAACTGGCATACTGTCGTCGACAAAGCCTCCGTCA
AAATTTATGGCAGCCGATTAGTTGAAGAAAACAAATTAAAGCAAAAACTCGGCCATAAACAAGCCGATTCTATTTTGACC
CTTCTGAAACTCGCCAACGAAAAACACATTACATTATAA

Upstream 100 bases:

>100_bases
TTTCAACCAAATGCACTAACTCCAAAAATGACTTTCCCATTATGTAAAATAATTTGGTTCTATGATTAAATAGAAGGTAA
AAGGTGAAGGAGAGAACAAC

Downstream 100 bases:

>100_bases
AAAAGAAAGAGCCCACAGGCTCTTTCTTTTTTAGTCAAATATCGTTTTCTTGTCCGGATGGCGCAAAAAGTCAAACAGCA
TGCTAAGCTGTGAGGGTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MAAQTDYKKQVVGILLSLAFVLFVFSFSERHEKPLVEGKKQENWHTVVDKASVKIYGSRLVEENKLKQKLGHKQADSILT
LLKLANEKHITL

Sequences:

>Translated_92_residues
MAAQTDYKKQVVGILLSLAFVLFVFSFSERHEKPLVEGKKQENWHTVVDKASVKIYGSRLVEENKLKQKLGHKQADSILT
LLKLANEKHITL
>Mature_91_residues
AAQTDYKKQVVGILLSLAFVLFVFSFSERHEKPLVEGKKQENWHTVVDKASVKIYGSRLVEENKLKQKLGHKQADSILTL
LKLANEKHITL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJIA_BACSU (O34679)

Other databases:

- EMBL:   AF015825
- EMBL:   AL009126
- PIR:   A69851
- RefSeq:   NP_389102.1
- EnsemblBacteria:   EBBACT00000002048
- GeneID:   939399
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU12200
- NMPDR:   fig|224308.1.peg.1221
- GenoList:   BSU12200
- GeneTree:   EBGT00050000002363
- OMA:   SERHEKP
- ProtClustDB:   CLSK887100
- BioCyc:   BSUB:BSU12200-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10504; Mature: 10373

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAQTDYKKQVVGILLSLAFVLFVFSFSERHEKPLVEGKKQENWHTVVDKASVKIYGSRL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VEENKLKQKLGHKQADSILTLLKLANEKHITL
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AAQTDYKKQVVGILLSLAFVLFVFSFSERHEKPLVEGKKQENWHTVVDKASVKIYGSRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VEENKLKQKLGHKQADSILTLLKLANEKHITL
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377