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The map label for this gene is yjcL

Identifier: 16078255

GI number: 16078255

Start: 1261426

End: 1262616

Strand: Reverse

Name: yjcL

Synonym: BSU11900

Alternate gene names: 16078255

Gene position: 1262616-1261426 (Counterclockwise)

Preceding gene: 16078256

Following gene: 16078254

Centisome position: 29.95

GC content: 45.93

Gene sequence:

>1191_bases
TTGCATTCTTTGATTTCTTCTGATGATGTATGGGTATTATGGGGGTTTATTGCGGTGTGGGCGGCAGTGAGCATCGGGCT
GGAGCAGCGCTTTAAGTGGGCGTCTGCTGTGTCGGGCGCTATTATCGCCCTTGCAGGTGCTATGGTGTTTACAAATGTAG
GAGTGCTTCCTGTTGAGTCGCCCGTGTATGACACTGTGTGGTCTTATGTGGTACCGCTGGCGATACCACTTTTATTGTTT
CAGATCAATGTTAGGCAAATTTTTAAGGAAAGCAGGCGTTTGCTGTTTATTTTTCTGATTAGCTCCGTTGGAACAGTGCT
TGGCAGTATCCTGGCTTTTTTTCTACTCAAACAGCATATTCCTTACTTAGATAAAATCGGTGGGATGATCAGCGCCTCTT
ATATCGGCGGCGGGGTCAACTTTGCGGCGATGGCGGCAAAATTTGAGACGCCTGGTGAATATGTGTCGGCTACCGTTGTG
GCTGATAATTTTATGATGGCGCTTTTGTTTTTTATTTTAATCAGCATTCCTGCACTCAAATGGTTTCAGCGGCATTATGC
CATGCCGTTTGAAGAGAAGGTAAAAGCCGATGGAAACAGCGGAAACAGTGCTGAAAGCTATTGGAAACGGAAGGATATTT
CCTTAAAGGATATCGCTTTTAATGCCGGTGCCGCTTTCGCGCTTGTTGCGGTTAGTATGAAGGTTTCCGGTTATTTTAAA
AGCATTTTTTCTCATCCCCTGCTGACCGGTACGCTTGGCGATCAGTACCTGGTTCTTACGTCTTTAACTGTTCTTATCAT
TTTTCTTTTCCCGCGTTTTTTTGAAAGGCTCAATGGATCTCAGGAGCTTGGAACCTTTTTGATTTATTTGTTTTTTGTGG
TGATCGGCATTCCTGCAGATCTCCGCTTAATCGTCACGAATGCGCCTCTTATTCTATTATTCGTGTTTATCATTGCGATT
AGCAATTTAGCGGTTTCCTTAGCTGCCGGAAAATTGTTCCGTGTGCGGCTTGAAGAAATTCTGCTCGCCGTCAACGCTAC
TGTCGGGGGACCGACGACTGCGGCTGCGATGGCAATTGCCAAGGGATGGCGGGAGCTTGTCGCCCCGATCATGCTTGTCG
GTACGCTCGGCTACTTAATCGGCAACTATGTTGGCACTTTTATGGGAAATTGGTTTTCTTCCTTCTTATAA

Upstream 100 bases:

>100_bases
CGTCAACTGCTTTTTTAGAAAAACTTTTTTTGGACTTGCTGTTCCGTTCCCCGGCTATTATAATATGTCTTAATTTTCTA
ACAATAGAGGTGATGGGGTT

Downstream 100 bases:

>100_bases
AAAGGATATTTGCATTTCCCTGAGAATAATGTAAGAGGAATGCTGACATGAGAACGGAGAGATCACTATATGTTAAAAGG
AAAAACCATTTATGTTAGAC

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MHSLISSDDVWVLWGFIAVWAAVSIGLEQRFKWASAVSGAIIALAGAMVFTNVGVLPVESPVYDTVWSYVVPLAIPLLLF
QINVRQIFKESRRLLFIFLISSVGTVLGSILAFFLLKQHIPYLDKIGGMISASYIGGGVNFAAMAAKFETPGEYVSATVV
ADNFMMALLFFILISIPALKWFQRHYAMPFEEKVKADGNSGNSAESYWKRKDISLKDIAFNAGAAFALVAVSMKVSGYFK
SIFSHPLLTGTLGDQYLVLTSLTVLIIFLFPRFFERLNGSQELGTFLIYLFFVVIGIPADLRLIVTNAPLILLFVFIIAI
SNLAVSLAAGKLFRVRLEEILLAVNATVGGPTTAAAMAIAKGWRELVAPIMLVGTLGYLIGNYVGTFMGNWFSSFL

Sequences:

>Translated_396_residues
MHSLISSDDVWVLWGFIAVWAAVSIGLEQRFKWASAVSGAIIALAGAMVFTNVGVLPVESPVYDTVWSYVVPLAIPLLLF
QINVRQIFKESRRLLFIFLISSVGTVLGSILAFFLLKQHIPYLDKIGGMISASYIGGGVNFAAMAAKFETPGEYVSATVV
ADNFMMALLFFILISIPALKWFQRHYAMPFEEKVKADGNSGNSAESYWKRKDISLKDIAFNAGAAFALVAVSMKVSGYFK
SIFSHPLLTGTLGDQYLVLTSLTVLIIFLFPRFFERLNGSQELGTFLIYLFFVVIGIPADLRLIVTNAPLILLFVFIIAI
SNLAVSLAAGKLFRVRLEEILLAVNATVGGPTTAAAMAIAKGWRELVAPIMLVGTLGYLIGNYVGTFMGNWFSSFL
>Mature_396_residues
MHSLISSDDVWVLWGFIAVWAAVSIGLEQRFKWASAVSGAIIALAGAMVFTNVGVLPVESPVYDTVWSYVVPLAIPLLLF
QINVRQIFKESRRLLFIFLISSVGTVLGSILAFFLLKQHIPYLDKIGGMISASYIGGGVNFAAMAAKFETPGEYVSATVV
ADNFMMALLFFILISIPALKWFQRHYAMPFEEKVKADGNSGNSAESYWKRKDISLKDIAFNAGAAFALVAVSMKVSGYFK
SIFSHPLLTGTLGDQYLVLTSLTVLIIFLFPRFFERLNGSQELGTFLIYLFFVVIGIPADLRLIVTNAPLILLFVFIIAI
SNLAVSLAAGKLFRVRLEEILLAVNATVGGPTTAAAMAIAKGWRELVAPIMLVGTLGYLIGNYVGTFMGNWFSSFL

Specific function: Unknown

COG id: COG5505

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJCL_BACSU (O31634)

Other databases:

- EMBL:   AL009126
- PIR:   D69847
- RefSeq:   NP_389072.1
- ProteinModelPortal:   O31634
- EnsemblBacteria:   EBBACT00000002096
- GeneID:   936434
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU11900
- NMPDR:   fig|224308.1.peg.1191
- GenoList:   BSU11900
- GeneTree:   EBGT00050000006285
- HOGENOM:   HBG508359
- OMA:   GVNFAAM
- ProtClustDB:   CLSK806654
- BioCyc:   BSUB:BSU11900-MONOMER
- InterPro:   IPR008537

Pfam domain/function: PF05684 DUF819

EC number: NA

Molecular weight: Translated: 43322; Mature: 43322

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc958dc4)-; HASH(0xe547970)-; HASH(0xe61be98)-; HASH(0xe14a564)-; HASH(0xe14a4c8)-; HASH(0xe25a8bc)-; HASH(0xced89d4)-; HASH(0xe60fa2c)-; HASH(0xe475624)-; HASH(0xe215228)-; HASH(0xdca6c70)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377